Gene : Glyma.16G101100 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR12959 - GPI TRANSAMIDASE COMPONENT PIG-T-RELATED Genomic Order:  1011
Name:  ? Glyma.16G101100 Secondary Identifier:  ? PAC:30558923
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G101100 0.5kb upstream 0.5kb upstream 5960 true Chr16: 20122432-20128391 Glycine max
Glyma.16G101100 0.5kb upstream 0.5kb upstream 500 false Chr16: 20127892-20128391 Glycine max
Glyma.16G101100 0.5kb downstream 0.5kb downstream 5960 true Chr16: 20121932-20127891 Glycine max
Glyma.16G101100 0.5kb downstream 0.5kb downstream 500 false Chr16: 20121932-20122431 Glycine max
Glyma.16G101100 1.0kb upstream 1.0kb upstream 6460 true Chr16: 20122432-20128891 Glycine max
Glyma.16G101100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 20127892-20128891 Glycine max
Glyma.16G101100 1.0kb downstream 1.0kb downstream 6460 true Chr16: 20121432-20127891 Glycine max
Glyma.16G101100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 20121432-20122431 Glycine max
Glyma.16G101100 2.0kb upstream 2.0kb upstream 7460 true Chr16: 20122432-20129891 Glycine max
Glyma.16G101100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 20127892-20129891 Glycine max
Glyma.16G101100 2.0kb downstream 2.0kb downstream 7460 true Chr16: 20120432-20127891 Glycine max
Glyma.16G101100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 20120432-20122431 Glycine max
Glyma.16G101100 5.0kb upstream 5.0kb upstream 10460 true Chr16: 20122432-20132891 Glycine max
Glyma.16G101100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 20127892-20132891 Glycine max
Glyma.16G101100 5.0kb downstream 5.0kb downstream 10460 true Chr16: 20117432-20127891 Glycine max
Glyma.16G101100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 20117432-20122431 Glycine max
Glyma.16G101100 10.0kb upstream 10.0kb upstream 15460 true Chr16: 20122432-20137891 Glycine max
Glyma.16G101100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 20127892-20137891 Glycine max
Glyma.16G101100 10.0kb downstream 10.0kb downstream 15460 true Chr16: 20112432-20127891 Glycine max
Glyma.16G101100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 20112432-20122431 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302034 5265 Fabidae View MSA
124065019 5270 Rosid View MSA
123738275 5271 Pentapetalae View MSA
122788314 5272 Eudicot View MSA
122043448 5273 Angiosperm View MSA
121344802 5274 Embryophyte View MSA
123425263 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.6692 0.0 15.7509    
cufflinks 5.05274 0.0 14.1642    
cufflinks 4.44561 0.0 12.6056   Low
cufflinks 6.10763 0.0 16.828    
cufflinks 6.42327 0.0 17.6714    
cufflinks 5.95955 0.0 16.4682    
cufflinks 7.07879 0.0 19.3451   High
cufflinks 5.35893 0.0 14.9266    
cufflinks 5.32959 0.0 14.8643    
cufflinks 2.357        
cufflinks 0.69       Low
cufflinks 3.103        
cufflinks 3.385       High
cufflinks 4.089       High
cufflinks 1.135       Low
cufflinks 2.281        
cufflinks 1.181       Low
cufflinks 3.238        
cufflinks 3.085        
cufflinks 2.462        
cufflinks 0.978       Low
cufflinks 2.44        
cufflinks 2.353        
cufflinks 1.196        
cufflinks 2.138        
cufflinks 1.423        

0 Strain