Gene : Glyma.16G133300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23324:SF71 - PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH2-RELATED Genomic Order:  1333
Name:  ? Glyma.16G133300 Secondary Identifier:  ? PAC:30560607
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G133300 0.5kb upstream 0.5kb upstream 5857 true Chr16: 28980524-28986380 Glycine max
Glyma.16G133300 0.5kb upstream 0.5kb upstream 500 false Chr16: 28985881-28986380 Glycine max
Glyma.16G133300 0.5kb downstream 0.5kb downstream 5857 true Chr16: 28980024-28985880 Glycine max
Glyma.16G133300 0.5kb downstream 0.5kb downstream 500 false Chr16: 28980024-28980523 Glycine max
Glyma.16G133300 1.0kb upstream 1.0kb upstream 6357 true Chr16: 28980524-28986880 Glycine max
Glyma.16G133300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 28985881-28986880 Glycine max
Glyma.16G133300 1.0kb downstream 1.0kb downstream 6357 true Chr16: 28979524-28985880 Glycine max
Glyma.16G133300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 28979524-28980523 Glycine max
Glyma.16G133300 2.0kb upstream 2.0kb upstream 7357 true Chr16: 28980524-28987880 Glycine max
Glyma.16G133300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 28985881-28987880 Glycine max
Glyma.16G133300 2.0kb downstream 2.0kb downstream 7357 true Chr16: 28978524-28985880 Glycine max
Glyma.16G133300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 28978524-28980523 Glycine max
Glyma.16G133300 5.0kb upstream 5.0kb upstream 10357 true Chr16: 28980524-28990880 Glycine max
Glyma.16G133300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 28985881-28990880 Glycine max
Glyma.16G133300 5.0kb downstream 5.0kb downstream 10357 true Chr16: 28975524-28985880 Glycine max
Glyma.16G133300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 28975524-28980523 Glycine max
Glyma.16G133300 10.0kb upstream 10.0kb upstream 15357 true Chr16: 28980524-28995880 Glycine max
Glyma.16G133300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 28985881-28995880 Glycine max
Glyma.16G133300 10.0kb downstream 10.0kb downstream 15357 true Chr16: 28970524-28985880 Glycine max
Glyma.16G133300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 28970524-28980523 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302310 5265 Fabidae View MSA
124068521 5270 Rosid View MSA
123742729 5271 Pentapetalae View MSA
122786942 5272 Eudicot View MSA
122050588 5273 Angiosperm View MSA
123429024 5275 Viridiplantae View MSA
121351321 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 63.9604 0.0 195.046 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.123263 0.0 0.478327 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 8.255     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.003     Low  
cufflinks 5.62       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain