Gene : Glyma.16G128600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR24349:SF87 - CALCIUM-DEPENDENT PROTEIN KINASE 16-RELATED Genomic Order:  1286
Name:  ? Glyma.16G128600 Secondary Identifier:  ? PAC:30560415
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G128600 0.5kb upstream 0.5kb upstream 5847 true Chr16: 28057444-28063290 Glycine max
Glyma.16G128600 0.5kb upstream 0.5kb upstream 500 false Chr16: 28062791-28063290 Glycine max
Glyma.16G128600 0.5kb downstream 0.5kb downstream 5847 true Chr16: 28056944-28062790 Glycine max
Glyma.16G128600 0.5kb downstream 0.5kb downstream 500 false Chr16: 28056944-28057443 Glycine max
Glyma.16G128600 1.0kb upstream 1.0kb upstream 6347 true Chr16: 28057444-28063790 Glycine max
Glyma.16G128600 1.0kb upstream 1.0kb upstream 1000 false Chr16: 28062791-28063790 Glycine max
Glyma.16G128600 1.0kb downstream 1.0kb downstream 6347 true Chr16: 28056444-28062790 Glycine max
Glyma.16G128600 1.0kb downstream 1.0kb downstream 1000 false Chr16: 28056444-28057443 Glycine max
Glyma.16G128600 2.0kb upstream 2.0kb upstream 7347 true Chr16: 28057444-28064790 Glycine max
Glyma.16G128600 2.0kb upstream 2.0kb upstream 2000 false Chr16: 28062791-28064790 Glycine max
Glyma.16G128600 2.0kb downstream 2.0kb downstream 7347 true Chr16: 28055444-28062790 Glycine max
Glyma.16G128600 2.0kb downstream 2.0kb downstream 2000 false Chr16: 28055444-28057443 Glycine max
Glyma.16G128600 5.0kb upstream 5.0kb upstream 10347 true Chr16: 28057444-28067790 Glycine max
Glyma.16G128600 5.0kb upstream 5.0kb upstream 5000 false Chr16: 28062791-28067790 Glycine max
Glyma.16G128600 5.0kb downstream 5.0kb downstream 10347 true Chr16: 28052444-28062790 Glycine max
Glyma.16G128600 5.0kb downstream 5.0kb downstream 5000 false Chr16: 28052444-28057443 Glycine max
Glyma.16G128600 10.0kb upstream 10.0kb upstream 15347 true Chr16: 28057444-28072790 Glycine max
Glyma.16G128600 10.0kb upstream 10.0kb upstream 10000 false Chr16: 28062791-28072790 Glycine max
Glyma.16G128600 10.0kb downstream 10.0kb downstream 15347 true Chr16: 28047444-28062790 Glycine max
Glyma.16G128600 10.0kb downstream 10.0kb downstream 10000 false Chr16: 28047444-28057443 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254939 5265 Fabidae View MSA
124063775 5270 Rosid View MSA
123736489 5271 Pentapetalae View MSA
122791414 5272 Eudicot View MSA
122046992 5273 Angiosperm View MSA
121348543 5274 Embryophyte View MSA
123380907 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.1079 0.0 48.6717    
cufflinks 10.7507 0.0 28.7129   Low
cufflinks 21.6391 0.0 58.7257 High  
cufflinks 30.3766 0.0 84.631 High High
cufflinks 16.292 0.0 43.6326    
cufflinks 16.0059 0.0 42.8504    
cufflinks 18.7063 0.0 50.3029    
cufflinks 12.6005 0.0 33.6165   Low
cufflinks 20.3855 0.0 55.0929 High  
cufflinks 4.932       Low
cufflinks 7.969     High  
cufflinks 11.628     High High
cufflinks 7.561     High  
cufflinks 7.449     High  
cufflinks 4.611       Low
cufflinks 9.193     High  
cufflinks 4.345       Low
cufflinks 13.451     High High
cufflinks 6.032        
cufflinks 12.717     High High
cufflinks 7.834     High  
cufflinks 10.735     High  
cufflinks 5.487       Low
cufflinks 8.341     High  
cufflinks 10.355     High  
cufflinks 7.259     High  

0 Strain