Gene : Glyma.16G118800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23416:SF63 - SERINE ACETYLTRANSFERASE 2-RELATED Genomic Order:  1188
Name:  ? Glyma.16G118800 Secondary Identifier:  ? PAC:30559222
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CYSTSYN-PWY Glycine max pathologic  
Gmax PWY-6936 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G118800 0.5kb upstream 0.5kb upstream 4766 true Chr16: 26469398-26474163 Glycine max
Glyma.16G118800 0.5kb upstream 0.5kb upstream 500 false Chr16: 26473664-26474163 Glycine max
Glyma.16G118800 0.5kb downstream 0.5kb downstream 4766 true Chr16: 26468898-26473663 Glycine max
Glyma.16G118800 0.5kb downstream 0.5kb downstream 500 false Chr16: 26468898-26469397 Glycine max
Glyma.16G118800 1.0kb upstream 1.0kb upstream 5266 true Chr16: 26469398-26474663 Glycine max
Glyma.16G118800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 26473664-26474663 Glycine max
Glyma.16G118800 1.0kb downstream 1.0kb downstream 5266 true Chr16: 26468398-26473663 Glycine max
Glyma.16G118800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 26468398-26469397 Glycine max
Glyma.16G118800 2.0kb upstream 2.0kb upstream 6266 true Chr16: 26469398-26475663 Glycine max
Glyma.16G118800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 26473664-26475663 Glycine max
Glyma.16G118800 2.0kb downstream 2.0kb downstream 6266 true Chr16: 26467398-26473663 Glycine max
Glyma.16G118800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 26467398-26469397 Glycine max
Glyma.16G118800 5.0kb upstream 5.0kb upstream 9266 true Chr16: 26469398-26478663 Glycine max
Glyma.16G118800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 26473664-26478663 Glycine max
Glyma.16G118800 5.0kb downstream 5.0kb downstream 9266 true Chr16: 26464398-26473663 Glycine max
Glyma.16G118800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 26464398-26469397 Glycine max
Glyma.16G118800 10.0kb upstream 10.0kb upstream 14266 true Chr16: 26469398-26483663 Glycine max
Glyma.16G118800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 26473664-26483663 Glycine max
Glyma.16G118800 10.0kb downstream 10.0kb downstream 14266 true Chr16: 26459398-26473663 Glycine max
Glyma.16G118800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 26459398-26469397 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121617982 5273 Angiosperm View MSA
122254638 5265 Fabidae View MSA
123996709 5270 Rosid View MSA
123571133 5271 Pentapetalae View MSA
122605863 5272 Eudicot View MSA
121349787 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.232172 0.0 1.17431    
cufflinks 1.13374 0.0 4.92405    
cufflinks 0.729924 0.0 3.35033    
cufflinks 0.453521 0.0 2.87558    
cufflinks 12.2562 0.0 47.8123   High
cufflinks 0.522175 0.0 2.48472    
cufflinks 0.37093 0.0 2.39403    
cufflinks 0.66515 0.0 3.04833    
cufflinks 32.9178 0.0 129.628 High High
cufflinks 0.019     Low  
cufflinks 2.969       High
cufflinks 0.12        
cufflinks 0.009     Low Low
cufflinks 0.01     Low Low
cufflinks 50.049     High High
cufflinks 0.054     Low  
cufflinks 0.027     Low  
cufflinks 0.17        
cufflinks 0.23        
cufflinks 0.026     Low  
cufflinks 1.841       High
cufflinks 0.035     Low  
cufflinks 0.031     Low  
cufflinks 0.54        
cufflinks 0.052     Low  
cufflinks 0.477        

0 Strain