Gene : Glyma.16G112300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14659:SF1 - ALPHA- AND GAMMA-ADAPTIN-BINDING PROTEIN P34 Genomic Order:  1123
Name:  ? Glyma.16G112300 Secondary Identifier:  ? PAC:30560725
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G112300 0.5kb upstream 0.5kb upstream 2941 true Chr16: 24949192-24952132 Glycine max
Glyma.16G112300 0.5kb upstream 0.5kb upstream 500 false Chr16: 24951633-24952132 Glycine max
Glyma.16G112300 0.5kb downstream 0.5kb downstream 2941 true Chr16: 24948692-24951632 Glycine max
Glyma.16G112300 0.5kb downstream 0.5kb downstream 500 false Chr16: 24948692-24949191 Glycine max
Glyma.16G112300 1.0kb upstream 1.0kb upstream 3441 true Chr16: 24949192-24952632 Glycine max
Glyma.16G112300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 24951633-24952632 Glycine max
Glyma.16G112300 1.0kb downstream 1.0kb downstream 3441 true Chr16: 24948192-24951632 Glycine max
Glyma.16G112300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 24948192-24949191 Glycine max
Glyma.16G112300 2.0kb upstream 2.0kb upstream 4441 true Chr16: 24949192-24953632 Glycine max
Glyma.16G112300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 24951633-24953632 Glycine max
Glyma.16G112300 2.0kb downstream 2.0kb downstream 4441 true Chr16: 24947192-24951632 Glycine max
Glyma.16G112300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 24947192-24949191 Glycine max
Glyma.16G112300 5.0kb upstream 5.0kb upstream 7441 true Chr16: 24949192-24956632 Glycine max
Glyma.16G112300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 24951633-24956632 Glycine max
Glyma.16G112300 5.0kb downstream 5.0kb downstream 7441 true Chr16: 24944192-24951632 Glycine max
Glyma.16G112300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 24944192-24949191 Glycine max
Glyma.16G112300 10.0kb upstream 10.0kb upstream 12441 true Chr16: 24949192-24961632 Glycine max
Glyma.16G112300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 24951633-24961632 Glycine max
Glyma.16G112300 10.0kb downstream 10.0kb downstream 12441 true Chr16: 24939192-24951632 Glycine max
Glyma.16G112300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 24939192-24949191 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309106 5265 Fabidae View MSA
124067682 5270 Rosid View MSA
123740476 5271 Pentapetalae View MSA
122792168 5272 Eudicot View MSA
122047585 5273 Angiosperm View MSA
121347157 5274 Embryophyte View MSA
123426154 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.561 0.0 33.8256   High
cufflinks 7.17785 0.0 20.1323   Low
cufflinks 7.12747 0.0 19.9298   Low
cufflinks 10.5262 0.0 28.596    
cufflinks 10.292 0.0 28.0107    
cufflinks 9.68476 0.0 26.4671    
cufflinks 13.3809 0.0 35.9587   High
cufflinks 10.5864 0.0 28.7581    
cufflinks 11.1562 0.0 30.2262    
cufflinks 5.513        
cufflinks 4.653       Low
cufflinks 6.043        
cufflinks 6.581        
cufflinks 7.565     High High
cufflinks 5.055       Low
cufflinks 6.678        
cufflinks 4.827       Low
cufflinks 6.541        
cufflinks 6.279        
cufflinks 7.655     High High
cufflinks 4.916       Low
cufflinks 7.631     High High
cufflinks 5.282        
cufflinks 6.316     High  
cufflinks 6.645        
cufflinks 5.164        

0 Strain