Gene : Glyma.16G116100 G. max Wm82.a2.v1
Defline:  (1 of 51) PF14309 - Domain of unknown function (DUF4378) (DUF4378) Genomic Order:  1161
Name:  ? Glyma.16G116100 Secondary Identifier:  ? PAC:30560166
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G116100 0.5kb upstream 0.5kb upstream 5864 true Chr16: 25850927-25856790 Glycine max
Glyma.16G116100 0.5kb upstream 0.5kb upstream 500 false Chr16: 25856291-25856790 Glycine max
Glyma.16G116100 0.5kb downstream 0.5kb downstream 5864 true Chr16: 25850427-25856290 Glycine max
Glyma.16G116100 0.5kb downstream 0.5kb downstream 500 false Chr16: 25850427-25850926 Glycine max
Glyma.16G116100 1.0kb upstream 1.0kb upstream 6364 true Chr16: 25850927-25857290 Glycine max
Glyma.16G116100 1.0kb upstream 1.0kb upstream 1000 false Chr16: 25856291-25857290 Glycine max
Glyma.16G116100 1.0kb downstream 1.0kb downstream 6364 true Chr16: 25849927-25856290 Glycine max
Glyma.16G116100 1.0kb downstream 1.0kb downstream 1000 false Chr16: 25849927-25850926 Glycine max
Glyma.16G116100 2.0kb upstream 2.0kb upstream 7364 true Chr16: 25850927-25858290 Glycine max
Glyma.16G116100 2.0kb upstream 2.0kb upstream 2000 false Chr16: 25856291-25858290 Glycine max
Glyma.16G116100 2.0kb downstream 2.0kb downstream 7364 true Chr16: 25848927-25856290 Glycine max
Glyma.16G116100 2.0kb downstream 2.0kb downstream 2000 false Chr16: 25848927-25850926 Glycine max
Glyma.16G116100 5.0kb upstream 5.0kb upstream 10364 true Chr16: 25850927-25861290 Glycine max
Glyma.16G116100 5.0kb upstream 5.0kb upstream 5000 false Chr16: 25856291-25861290 Glycine max
Glyma.16G116100 5.0kb downstream 5.0kb downstream 10364 true Chr16: 25845927-25856290 Glycine max
Glyma.16G116100 5.0kb downstream 5.0kb downstream 5000 false Chr16: 25845927-25850926 Glycine max
Glyma.16G116100 10.0kb upstream 10.0kb upstream 15364 true Chr16: 25850927-25866290 Glycine max
Glyma.16G116100 10.0kb upstream 10.0kb upstream 10000 false Chr16: 25856291-25866290 Glycine max
Glyma.16G116100 10.0kb downstream 10.0kb downstream 15364 true Chr16: 25840927-25856290 Glycine max
Glyma.16G116100 10.0kb downstream 10.0kb downstream 10000 false Chr16: 25840927-25850926 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254924 5265 Fabidae View MSA
124065017 5270 Rosid View MSA
123737435 5271 Pentapetalae View MSA
122794026 5272 Eudicot View MSA
122043735 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.13957 0.0 0.933448 Low Low
cufflinks 1.21801 0.0 5.61809    
cufflinks 2.10901 0.0 7.7478    
cufflinks 1.33627 0.0 5.94242    
cufflinks 1.35706 0.0 4.47836    
cufflinks 1.36373 0.0 4.48783    
cufflinks 0.302372 0.0 1.37629   Low
cufflinks 2.98428 0.0 9.97912   High
cufflinks 1.07117 0.0 5.21852    
cufflinks 3.934       High
cufflinks 0.031     Low Low
cufflinks 0.725       High
cufflinks 0.483        
cufflinks 0.621        
cufflinks 0.226        
cufflinks 0.162        
cufflinks 0.154        
cufflinks 0.518        
cufflinks 0.307        
cufflinks 0.082     Low  
cufflinks 0.069        
cufflinks 0.099        
cufflinks 0.121        
cufflinks 0.048     Low Low
cufflinks 0.133        
cufflinks 0.083        

0 Strain