Gene : Glyma.16G117600 G. max Wm82.a2.v1
Defline:  (1 of 5) 2.7.7.79 - tRNA(His) guanylyltransferase / Histidine tRNA guanylyltransferase Genomic Order:  1176
Name:  ? Glyma.16G117600 Secondary Identifier:  ? PAC:30559099
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G117600 0.5kb upstream 0.5kb upstream 2033 true Chr16: 26247904-26249936 Glycine max
Glyma.16G117600 0.5kb upstream 0.5kb upstream 500 false Chr16: 26249437-26249936 Glycine max
Glyma.16G117600 0.5kb downstream 0.5kb downstream 2033 true Chr16: 26247404-26249436 Glycine max
Glyma.16G117600 0.5kb downstream 0.5kb downstream 500 false Chr16: 26247404-26247903 Glycine max
Glyma.16G117600 1.0kb upstream 1.0kb upstream 2533 true Chr16: 26247904-26250436 Glycine max
Glyma.16G117600 1.0kb upstream 1.0kb upstream 1000 false Chr16: 26249437-26250436 Glycine max
Glyma.16G117600 1.0kb downstream 1.0kb downstream 2533 true Chr16: 26246904-26249436 Glycine max
Glyma.16G117600 1.0kb downstream 1.0kb downstream 1000 false Chr16: 26246904-26247903 Glycine max
Glyma.16G117600 2.0kb upstream 2.0kb upstream 3533 true Chr16: 26247904-26251436 Glycine max
Glyma.16G117600 2.0kb upstream 2.0kb upstream 2000 false Chr16: 26249437-26251436 Glycine max
Glyma.16G117600 2.0kb downstream 2.0kb downstream 3533 true Chr16: 26245904-26249436 Glycine max
Glyma.16G117600 2.0kb downstream 2.0kb downstream 2000 false Chr16: 26245904-26247903 Glycine max
Glyma.16G117600 5.0kb upstream 5.0kb upstream 6533 true Chr16: 26247904-26254436 Glycine max
Glyma.16G117600 5.0kb upstream 5.0kb upstream 5000 false Chr16: 26249437-26254436 Glycine max
Glyma.16G117600 5.0kb downstream 5.0kb downstream 6533 true Chr16: 26242904-26249436 Glycine max
Glyma.16G117600 5.0kb downstream 5.0kb downstream 5000 false Chr16: 26242904-26247903 Glycine max
Glyma.16G117600 10.0kb upstream 10.0kb upstream 11533 true Chr16: 26247904-26259436 Glycine max
Glyma.16G117600 10.0kb upstream 10.0kb upstream 10000 false Chr16: 26249437-26259436 Glycine max
Glyma.16G117600 10.0kb downstream 10.0kb downstream 11533 true Chr16: 26237904-26249436 Glycine max
Glyma.16G117600 10.0kb downstream 10.0kb downstream 10000 false Chr16: 26237904-26247903 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300754 5265 Fabidae View MSA
124063140 5270 Rosid View MSA
123748870 5271 Pentapetalae View MSA
122795509 5272 Eudicot View MSA
122049753 5273 Angiosperm View MSA
121349209 5274 Embryophyte View MSA
123426197 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.952311 0.0 5.41514   High
cufflinks 0.655666 0.0 3.78676    
cufflinks 0.388223 0.0 2.89707    
cufflinks 0.751765 0.0 4.42616    
cufflinks 0.309773 0.0 2.11239   Low
cufflinks 0.241167 0.0 2.07469 Low Low
cufflinks 0.878243 0.0 4.55882   High
cufflinks 0.691009 0.0 3.95339    
cufflinks 0.416154 0.0 2.91659    
cufflinks 0.36       Low
cufflinks 0.563        
cufflinks 0.797        
cufflinks 0.597        
cufflinks 0.846        
cufflinks 0.475        
cufflinks 0.552        
cufflinks 0.414       Low
cufflinks 1.044       High
cufflinks 0.949       High
cufflinks 0.892        
cufflinks 0.438        
cufflinks 0.801        
cufflinks 0.782        
cufflinks 0.336       Low
cufflinks 0.944       High
cufflinks 0.429        

0 Strain