Gene : Glyma.16G165800 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR21649:SF26 - CHLOROPHYLL A-B BINDING PROTEIN 1, CHLOROPLASTIC-RELATED Genomic Order:  1658
Name:  ? Glyma.16G165800 Secondary Identifier:  ? PAC:30561378
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G165800 0.5kb upstream 0.5kb upstream 2384 true Chr16: 32483854-32486237 Glycine max
Glyma.16G165800 0.5kb upstream 0.5kb upstream 500 false Chr16: 32483854-32484353 Glycine max
Glyma.16G165800 0.5kb downstream 0.5kb downstream 2384 true Chr16: 32484354-32486737 Glycine max
Glyma.16G165800 0.5kb downstream 0.5kb downstream 500 false Chr16: 32486238-32486737 Glycine max
Glyma.16G165800 1.0kb upstream 1.0kb upstream 2884 true Chr16: 32483354-32486237 Glycine max
Glyma.16G165800 1.0kb upstream 1.0kb upstream 1000 false Chr16: 32483354-32484353 Glycine max
Glyma.16G165800 1.0kb downstream 1.0kb downstream 2884 true Chr16: 32484354-32487237 Glycine max
Glyma.16G165800 1.0kb downstream 1.0kb downstream 1000 false Chr16: 32486238-32487237 Glycine max
Glyma.16G165800 2.0kb upstream 2.0kb upstream 3884 true Chr16: 32482354-32486237 Glycine max
Glyma.16G165800 2.0kb upstream 2.0kb upstream 2000 false Chr16: 32482354-32484353 Glycine max
Glyma.16G165800 2.0kb downstream 2.0kb downstream 3884 true Chr16: 32484354-32488237 Glycine max
Glyma.16G165800 2.0kb downstream 2.0kb downstream 2000 false Chr16: 32486238-32488237 Glycine max
Glyma.16G165800 5.0kb upstream 5.0kb upstream 6884 true Chr16: 32479354-32486237 Glycine max
Glyma.16G165800 5.0kb upstream 5.0kb upstream 5000 false Chr16: 32479354-32484353 Glycine max
Glyma.16G165800 5.0kb downstream 5.0kb downstream 6884 true Chr16: 32484354-32491237 Glycine max
Glyma.16G165800 5.0kb downstream 5.0kb downstream 5000 false Chr16: 32486238-32491237 Glycine max
Glyma.16G165800 10.0kb upstream 10.0kb upstream 11884 true Chr16: 32474354-32486237 Glycine max
Glyma.16G165800 10.0kb upstream 10.0kb upstream 10000 false Chr16: 32474354-32484353 Glycine max
Glyma.16G165800 10.0kb downstream 10.0kb downstream 11884 true Chr16: 32484354-32496237 Glycine max
Glyma.16G165800 10.0kb downstream 10.0kb downstream 10000 false Chr16: 32486238-32496237 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314115 5265 Fabidae View MSA
124072480 5270 Rosid View MSA
123751711 5271 Pentapetalae View MSA
122794402 5272 Eudicot View MSA
122050341 5273 Angiosperm View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.1799 0.0 61.8874 High  
cufflinks 106.552 0.0 329.244 High High
cufflinks 29.0413 0.0 78.0216 High  
cufflinks 55.0777 0.0 155.009 High  
cufflinks 0.522132 0.0 1.93785   Low
cufflinks 3.68328 0.0 11.2908    
cufflinks 57.8867 0.0 163.844 High  
cufflinks 23.5708 0.0 62.9573 High  
cufflinks 0.533635 0.0 1.97709   Low
cufflinks 120.721     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 42.512     High  
cufflinks 0.017     Low Low
cufflinks 0.039     Low  
cufflinks 0.011     Low Low
cufflinks 376.602     High  
cufflinks 0.017     Low Low
cufflinks 68.554     High  
cufflinks 82.396     High  
cufflinks 412.023     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 403.258     High  
cufflinks 343.51     High  
cufflinks 0.011     Low Low
cufflinks 480.464     High  
cufflinks 0.009     Low Low

0 Strain