Gene : Glyma.16G172400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR24223:SF192 - ABC TRANSPORTER C FAMILY MEMBER 10 Genomic Order:  1724
Name:  ? Glyma.16G172400 Secondary Identifier:  ? PAC:30561661
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G172400 0.5kb upstream 0.5kb upstream 15696 true Chr16: 33304094-33319789 Glycine max
Glyma.16G172400 0.5kb upstream 0.5kb upstream 500 false Chr16: 33304094-33304593 Glycine max
Glyma.16G172400 0.5kb downstream 0.5kb downstream 15696 true Chr16: 33304594-33320289 Glycine max
Glyma.16G172400 0.5kb downstream 0.5kb downstream 500 false Chr16: 33319790-33320289 Glycine max
Glyma.16G172400 1.0kb upstream 1.0kb upstream 16196 true Chr16: 33303594-33319789 Glycine max
Glyma.16G172400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 33303594-33304593 Glycine max
Glyma.16G172400 1.0kb downstream 1.0kb downstream 16196 true Chr16: 33304594-33320789 Glycine max
Glyma.16G172400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 33319790-33320789 Glycine max
Glyma.16G172400 2.0kb upstream 2.0kb upstream 17196 true Chr16: 33302594-33319789 Glycine max
Glyma.16G172400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 33302594-33304593 Glycine max
Glyma.16G172400 2.0kb downstream 2.0kb downstream 17196 true Chr16: 33304594-33321789 Glycine max
Glyma.16G172400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 33319790-33321789 Glycine max
Glyma.16G172400 5.0kb upstream 5.0kb upstream 20196 true Chr16: 33299594-33319789 Glycine max
Glyma.16G172400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 33299594-33304593 Glycine max
Glyma.16G172400 5.0kb downstream 5.0kb downstream 20196 true Chr16: 33304594-33324789 Glycine max
Glyma.16G172400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 33319790-33324789 Glycine max
Glyma.16G172400 10.0kb upstream 10.0kb upstream 25196 true Chr16: 33294594-33319789 Glycine max
Glyma.16G172400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 33294594-33304593 Glycine max
Glyma.16G172400 10.0kb downstream 10.0kb downstream 25196 true Chr16: 33304594-33329789 Glycine max
Glyma.16G172400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 33319790-33329789 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315939 5265 Fabidae View MSA
124062528 5270 Rosid View MSA
123749567 5271 Pentapetalae View MSA
122793261 5272 Eudicot View MSA
122043507 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121346879 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00847629 0.0 0.0402739 Low Low
cufflinks 2.22674 0.0 11.0481    
cufflinks 0.42395 0.0 2.57932    
cufflinks 0.163441 0.0 1.51986 Low  
cufflinks 0.233346 0.0 1.54829    
cufflinks 5.75641 0.0 25.0632   High
cufflinks 1.20976 0.0 6.78686    
cufflinks 0.89457 0.0 5.90748    
cufflinks 1.19922 0.0 8.19378    
cufflinks 0.035     Low  
cufflinks 0.002     Low Low
cufflinks 0.054     Low  
cufflinks 0.019     Low  
cufflinks 0.008     Low  
cufflinks 0.015     Low  
cufflinks 0.033     Low  
cufflinks 0.063     Low  
cufflinks 0.025     Low  
cufflinks 0.207       High
cufflinks 0.037     Low  
cufflinks 0.007     Low  
cufflinks 0.026     Low  
cufflinks 0.064     Low  
cufflinks 0.002     Low Low
cufflinks 0.048     Low  
cufflinks 0.005     Low Low

0 Strain