Gene : Glyma.16G157300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11206:SF75 - MATE EFFLUX FAMILY PROTEIN Genomic Order:  1573
Name:  ? Glyma.16G157300 Secondary Identifier:  ? PAC:30561091
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G157300 0.5kb upstream 0.5kb upstream 5645 true Chr16: 31794899-31800543 Glycine max
Glyma.16G157300 0.5kb upstream 0.5kb upstream 500 false Chr16: 31800044-31800543 Glycine max
Glyma.16G157300 0.5kb downstream 0.5kb downstream 5645 true Chr16: 31794399-31800043 Glycine max
Glyma.16G157300 0.5kb downstream 0.5kb downstream 500 false Chr16: 31794399-31794898 Glycine max
Glyma.16G157300 1.0kb upstream 1.0kb upstream 6145 true Chr16: 31794899-31801043 Glycine max
Glyma.16G157300 1.0kb upstream 1.0kb upstream 1000 false Chr16: 31800044-31801043 Glycine max
Glyma.16G157300 1.0kb downstream 1.0kb downstream 6145 true Chr16: 31793899-31800043 Glycine max
Glyma.16G157300 1.0kb downstream 1.0kb downstream 1000 false Chr16: 31793899-31794898 Glycine max
Glyma.16G157300 2.0kb upstream 2.0kb upstream 7145 true Chr16: 31794899-31802043 Glycine max
Glyma.16G157300 2.0kb upstream 2.0kb upstream 2000 false Chr16: 31800044-31802043 Glycine max
Glyma.16G157300 2.0kb downstream 2.0kb downstream 7145 true Chr16: 31792899-31800043 Glycine max
Glyma.16G157300 2.0kb downstream 2.0kb downstream 2000 false Chr16: 31792899-31794898 Glycine max
Glyma.16G157300 5.0kb upstream 5.0kb upstream 10145 true Chr16: 31794899-31805043 Glycine max
Glyma.16G157300 5.0kb upstream 5.0kb upstream 5000 false Chr16: 31800044-31805043 Glycine max
Glyma.16G157300 5.0kb downstream 5.0kb downstream 10145 true Chr16: 31789899-31800043 Glycine max
Glyma.16G157300 5.0kb downstream 5.0kb downstream 5000 false Chr16: 31789899-31794898 Glycine max
Glyma.16G157300 10.0kb upstream 10.0kb upstream 15145 true Chr16: 31794899-31810043 Glycine max
Glyma.16G157300 10.0kb upstream 10.0kb upstream 10000 false Chr16: 31800044-31810043 Glycine max
Glyma.16G157300 10.0kb downstream 10.0kb downstream 15145 true Chr16: 31784899-31800043 Glycine max
Glyma.16G157300 10.0kb downstream 10.0kb downstream 10000 false Chr16: 31784899-31794898 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299053 5265 Fabidae View MSA
124062367 5270 Rosid View MSA
123750437 5271 Pentapetalae View MSA
122790105 5272 Eudicot View MSA
122045079 5273 Angiosperm View MSA
121345520 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.130165 0.0 0.505368 Low Low
cufflinks 0.509429 0.0 3.05507    
cufflinks 1.56004 0.0 7.32339    
cufflinks 0.436317 0.0 2.65799    
cufflinks 2.68528 0.0 10.5157   High
cufflinks 0.533654 0.0 3.14216    
cufflinks 0.190209 0.0 0.912026 Low Low
cufflinks 0.67056 0.0 3.80022    
cufflinks 3.98419 0.0 13.921   High
cufflinks 0.128        
cufflinks 0.452        
cufflinks 0.762        
cufflinks 1.339       High
cufflinks 0.657        
cufflinks 0.344        
cufflinks 0.023     Low Low
cufflinks 0.267        
cufflinks 0.41        
cufflinks 0.161        
cufflinks 0.011     Low Low
cufflinks 0.306        
cufflinks 0.019     Low Low
cufflinks 0.007     Low Low
cufflinks 0.577        
cufflinks 0.036     Low  
cufflinks 0.517        

0 Strain