Gene : Glyma.16G159500 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR11017//PTHR11017:SF167 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN Genomic Order:  1595
Name:  ? Glyma.16G159500 Secondary Identifier:  ? PAC:30561968
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G159500 0.5kb upstream 0.5kb upstream 3968 true Chr16: 31925022-31928989 Glycine max
Glyma.16G159500 0.5kb upstream 0.5kb upstream 500 false Chr16: 31925022-31925521 Glycine max
Glyma.16G159500 0.5kb downstream 0.5kb downstream 3968 true Chr16: 31925522-31929489 Glycine max
Glyma.16G159500 0.5kb downstream 0.5kb downstream 500 false Chr16: 31928990-31929489 Glycine max
Glyma.16G159500 1.0kb upstream 1.0kb upstream 4468 true Chr16: 31924522-31928989 Glycine max
Glyma.16G159500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 31924522-31925521 Glycine max
Glyma.16G159500 1.0kb downstream 1.0kb downstream 4468 true Chr16: 31925522-31929989 Glycine max
Glyma.16G159500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 31928990-31929989 Glycine max
Glyma.16G159500 2.0kb upstream 2.0kb upstream 5468 true Chr16: 31923522-31928989 Glycine max
Glyma.16G159500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 31923522-31925521 Glycine max
Glyma.16G159500 2.0kb downstream 2.0kb downstream 5468 true Chr16: 31925522-31930989 Glycine max
Glyma.16G159500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 31928990-31930989 Glycine max
Glyma.16G159500 5.0kb upstream 5.0kb upstream 8468 true Chr16: 31920522-31928989 Glycine max
Glyma.16G159500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 31920522-31925521 Glycine max
Glyma.16G159500 5.0kb downstream 5.0kb downstream 8468 true Chr16: 31925522-31933989 Glycine max
Glyma.16G159500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 31928990-31933989 Glycine max
Glyma.16G159500 10.0kb upstream 10.0kb upstream 13468 true Chr16: 31915522-31928989 Glycine max
Glyma.16G159500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 31915522-31925521 Glycine max
Glyma.16G159500 10.0kb downstream 10.0kb downstream 13468 true Chr16: 31925522-31938989 Glycine max
Glyma.16G159500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 31928990-31938989 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315467 5265 Fabidae View MSA
124039304 5270 Rosid View MSA
123753572 5271 Pentapetalae View MSA
122797897 5272 Eudicot View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.134574 0.0 0.517542 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 7.96885E-4 0.0 0.00558766 Low Low
cufflinks 0.157616 0.0 0.602326 Low  
cufflinks 2.63382 0.0 7.81681   High
cufflinks 6.24026E-4 0.0 0.00497105 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.665241 0.0 2.34212    
cufflinks 0.014     Low Low
cufflinks 1.272        
cufflinks 0.004     Low Low
cufflinks 1.346        
cufflinks 0.741        
cufflinks 0.24        
cufflinks 0.017     Low  
cufflinks 0.262        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.545        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 1.875       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.666        

0 Strain