Gene : Glyma.16G148500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11594 - 40S RIBOSOMAL PROTEIN S27 Genomic Order:  1485
Name:  ? Glyma.16G148500 Secondary Identifier:  ? PAC:30560946
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G148500 0.5kb upstream 0.5kb upstream 1833 true Chr16: 30906023-30907855 Glycine max
Glyma.16G148500 0.5kb upstream 0.5kb upstream 500 false Chr16: 30906023-30906522 Glycine max
Glyma.16G148500 0.5kb downstream 0.5kb downstream 1833 true Chr16: 30906523-30908355 Glycine max
Glyma.16G148500 0.5kb downstream 0.5kb downstream 500 false Chr16: 30907856-30908355 Glycine max
Glyma.16G148500 1.0kb upstream 1.0kb upstream 2333 true Chr16: 30905523-30907855 Glycine max
Glyma.16G148500 1.0kb upstream 1.0kb upstream 1000 false Chr16: 30905523-30906522 Glycine max
Glyma.16G148500 1.0kb downstream 1.0kb downstream 2333 true Chr16: 30906523-30908855 Glycine max
Glyma.16G148500 1.0kb downstream 1.0kb downstream 1000 false Chr16: 30907856-30908855 Glycine max
Glyma.16G148500 2.0kb upstream 2.0kb upstream 3333 true Chr16: 30904523-30907855 Glycine max
Glyma.16G148500 2.0kb upstream 2.0kb upstream 2000 false Chr16: 30904523-30906522 Glycine max
Glyma.16G148500 2.0kb downstream 2.0kb downstream 3333 true Chr16: 30906523-30909855 Glycine max
Glyma.16G148500 2.0kb downstream 2.0kb downstream 2000 false Chr16: 30907856-30909855 Glycine max
Glyma.16G148500 5.0kb upstream 5.0kb upstream 6333 true Chr16: 30901523-30907855 Glycine max
Glyma.16G148500 5.0kb upstream 5.0kb upstream 5000 false Chr16: 30901523-30906522 Glycine max
Glyma.16G148500 5.0kb downstream 5.0kb downstream 6333 true Chr16: 30906523-30912855 Glycine max
Glyma.16G148500 5.0kb downstream 5.0kb downstream 5000 false Chr16: 30907856-30912855 Glycine max
Glyma.16G148500 10.0kb upstream 10.0kb upstream 11333 true Chr16: 30896523-30907855 Glycine max
Glyma.16G148500 10.0kb upstream 10.0kb upstream 10000 false Chr16: 30896523-30906522 Glycine max
Glyma.16G148500 10.0kb downstream 10.0kb downstream 11333 true Chr16: 30906523-30917855 Glycine max
Glyma.16G148500 10.0kb downstream 10.0kb downstream 10000 false Chr16: 30907856-30917855 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041078 5273 Angiosperm View MSA
122314519 5265 Fabidae View MSA
124065866 5270 Rosid View MSA
123752077 5271 Pentapetalae View MSA
122796838 5272 Eudicot View MSA
121348120 5274 Embryophyte View MSA
123423805 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 110.8 0.0 305.327 High  
cufflinks 185.76 0.0 544.657 High  
cufflinks 90.9205 0.0 247.235 High Low
cufflinks 85.3742 0.0 231.213 High Low
cufflinks 215.549 0.0 645.615 High  
cufflinks 181.625 0.0 531.284 High  
cufflinks 321.762 0.0 1030.87 High High
cufflinks 140.35 0.0 397.505 High  
cufflinks 181.59 0.0 531.446 High  
cufflinks 55.907     High  
cufflinks 43.484     High  
cufflinks 38.637     High  
cufflinks 116.059     High High
cufflinks 192.129     High High
cufflinks 35.5     High  
cufflinks 47.37     High  
cufflinks 45.464     High  
cufflinks 47.252     High  
cufflinks 78.535     High  
cufflinks 40.259     High  
cufflinks 48.351     High  
cufflinks 39.604     High  
cufflinks 48.549     High  
cufflinks 52.201     High  
cufflinks 47.022     High  
cufflinks 51.419     High  

0 Strain