Gene : Glyma.16G152400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22763:SF39 - RING/U-BOX DOMAIN-CONTAINING PROTEIN Genomic Order:  1524
Name:  ? Glyma.16G152400 Secondary Identifier:  ? PAC:30561336
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G152400 0.5kb upstream 0.5kb upstream 2323 true Chr16: 31301770-31304092 Glycine max
Glyma.16G152400 0.5kb upstream 0.5kb upstream 500 false Chr16: 31303593-31304092 Glycine max
Glyma.16G152400 0.5kb downstream 0.5kb downstream 2323 true Chr16: 31301270-31303592 Glycine max
Glyma.16G152400 0.5kb downstream 0.5kb downstream 500 false Chr16: 31301270-31301769 Glycine max
Glyma.16G152400 1.0kb upstream 1.0kb upstream 2823 true Chr16: 31301770-31304592 Glycine max
Glyma.16G152400 1.0kb upstream 1.0kb upstream 1000 false Chr16: 31303593-31304592 Glycine max
Glyma.16G152400 1.0kb downstream 1.0kb downstream 2823 true Chr16: 31300770-31303592 Glycine max
Glyma.16G152400 1.0kb downstream 1.0kb downstream 1000 false Chr16: 31300770-31301769 Glycine max
Glyma.16G152400 2.0kb upstream 2.0kb upstream 3823 true Chr16: 31301770-31305592 Glycine max
Glyma.16G152400 2.0kb upstream 2.0kb upstream 2000 false Chr16: 31303593-31305592 Glycine max
Glyma.16G152400 2.0kb downstream 2.0kb downstream 3823 true Chr16: 31299770-31303592 Glycine max
Glyma.16G152400 2.0kb downstream 2.0kb downstream 2000 false Chr16: 31299770-31301769 Glycine max
Glyma.16G152400 5.0kb upstream 5.0kb upstream 6823 true Chr16: 31301770-31308592 Glycine max
Glyma.16G152400 5.0kb upstream 5.0kb upstream 5000 false Chr16: 31303593-31308592 Glycine max
Glyma.16G152400 5.0kb downstream 5.0kb downstream 6823 true Chr16: 31296770-31303592 Glycine max
Glyma.16G152400 5.0kb downstream 5.0kb downstream 5000 false Chr16: 31296770-31301769 Glycine max
Glyma.16G152400 10.0kb upstream 10.0kb upstream 11823 true Chr16: 31301770-31313592 Glycine max
Glyma.16G152400 10.0kb upstream 10.0kb upstream 10000 false Chr16: 31303593-31313592 Glycine max
Glyma.16G152400 10.0kb downstream 10.0kb downstream 11823 true Chr16: 31291770-31303592 Glycine max
Glyma.16G152400 10.0kb downstream 10.0kb downstream 10000 false Chr16: 31291770-31301769 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309509 5265 Fabidae View MSA
124061654 5270 Rosid View MSA
123753393 5271 Pentapetalae View MSA
122788391 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.297993 0.0 1.12695    
cufflinks 0.0699554 0.0 0.280371 Low  
cufflinks 12.7446 0.0 34.133   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0306683 0.0 0.128342 Low  
cufflinks 0.110515 0.0 0.435439 Low  
cufflinks 0.0312466 0.0 0.130473 Low  
cufflinks 0.0463267 0.0 0.188802 Low  
cufflinks 0.177154 0.0 0.685224 Low  
cufflinks 0.026     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.575       High
cufflinks 0.018     Low  
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.041     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.071     Low  
cufflinks 0.05     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low  
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  
cufflinks 0.009     Low Low

0 Strain