Gene : Glyma.16G141200 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR12320:SF16 - PROTEIN PHOSPHATASE 2C 80-RELATED Genomic Order:  1412
Name:  ? Glyma.16G141200 Secondary Identifier:  ? PAC:30561295
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G141200 0.5kb upstream 0.5kb upstream 6243 true Chr16: 29910674-29916916 Glycine max
Glyma.16G141200 0.5kb upstream 0.5kb upstream 500 false Chr16: 29910674-29911173 Glycine max
Glyma.16G141200 0.5kb downstream 0.5kb downstream 6243 true Chr16: 29911174-29917416 Glycine max
Glyma.16G141200 0.5kb downstream 0.5kb downstream 500 false Chr16: 29916917-29917416 Glycine max
Glyma.16G141200 1.0kb upstream 1.0kb upstream 6743 true Chr16: 29910174-29916916 Glycine max
Glyma.16G141200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 29910174-29911173 Glycine max
Glyma.16G141200 1.0kb downstream 1.0kb downstream 6743 true Chr16: 29911174-29917916 Glycine max
Glyma.16G141200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 29916917-29917916 Glycine max
Glyma.16G141200 2.0kb upstream 2.0kb upstream 7743 true Chr16: 29909174-29916916 Glycine max
Glyma.16G141200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 29909174-29911173 Glycine max
Glyma.16G141200 2.0kb downstream 2.0kb downstream 7743 true Chr16: 29911174-29918916 Glycine max
Glyma.16G141200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 29916917-29918916 Glycine max
Glyma.16G141200 5.0kb upstream 5.0kb upstream 10743 true Chr16: 29906174-29916916 Glycine max
Glyma.16G141200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 29906174-29911173 Glycine max
Glyma.16G141200 5.0kb downstream 5.0kb downstream 10743 true Chr16: 29911174-29921916 Glycine max
Glyma.16G141200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 29916917-29921916 Glycine max
Glyma.16G141200 10.0kb upstream 10.0kb upstream 15743 true Chr16: 29901174-29916916 Glycine max
Glyma.16G141200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 29901174-29911173 Glycine max
Glyma.16G141200 10.0kb downstream 10.0kb downstream 15743 true Chr16: 29911174-29926916 Glycine max
Glyma.16G141200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 29916917-29926916 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314824 5265 Fabidae View MSA
124074928 5270 Rosid View MSA
123743389 5271 Pentapetalae View MSA
122796886 5272 Eudicot View MSA
122043108 5273 Angiosperm View MSA
121351334 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.4743 0.0 51.9103   High
cufflinks 3.83542 0.0 17.9666    
cufflinks 0.840494 0.0 5.30425   Low
cufflinks 1.55022 0.0 8.83922    
cufflinks 3.11273 0.0 14.3333    
cufflinks 1.84671 0.0 9.53086    
cufflinks 6.41898 0.0 32.1275    
cufflinks 1.83078 0.0 9.48317    
cufflinks 2.16888 0.0 7.99803    
cufflinks 0.117        
cufflinks 0.021     Low Low
cufflinks 0.076     Low  
cufflinks 0.144        
cufflinks 0.151        
cufflinks 0.011     Low Low
cufflinks 0.402       High
cufflinks 0.061     Low  
cufflinks 0.085     Low  
cufflinks 0.231        
cufflinks 0.421       High
cufflinks 0.029     Low Low
cufflinks 0.427       High
cufflinks 0.541       High
cufflinks 0.028     Low Low
cufflinks 0.412       High
cufflinks 0.033     Low  

0 Strain