Gene : Glyma.16G207200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22884//PTHR22884:SF362 - SET DOMAIN PROTEINS Genomic Order:  2072
Name:  ? Glyma.16G207200 Secondary Identifier:  ? PAC:30560337
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G207200 0.5kb upstream 0.5kb upstream 11637 true Chr16: 36705361-36716997 Glycine max
Glyma.16G207200 0.5kb upstream 0.5kb upstream 500 false Chr16: 36705361-36705860 Glycine max
Glyma.16G207200 0.5kb downstream 0.5kb downstream 11637 true Chr16: 36705861-36717497 Glycine max
Glyma.16G207200 0.5kb downstream 0.5kb downstream 500 false Chr16: 36716998-36717497 Glycine max
Glyma.16G207200 1.0kb upstream 1.0kb upstream 12137 true Chr16: 36704861-36716997 Glycine max
Glyma.16G207200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 36704861-36705860 Glycine max
Glyma.16G207200 1.0kb downstream 1.0kb downstream 12137 true Chr16: 36705861-36717997 Glycine max
Glyma.16G207200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 36716998-36717997 Glycine max
Glyma.16G207200 2.0kb upstream 2.0kb upstream 13137 true Chr16: 36703861-36716997 Glycine max
Glyma.16G207200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 36703861-36705860 Glycine max
Glyma.16G207200 2.0kb downstream 2.0kb downstream 13137 true Chr16: 36705861-36718997 Glycine max
Glyma.16G207200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 36716998-36718997 Glycine max
Glyma.16G207200 5.0kb upstream 5.0kb upstream 16137 true Chr16: 36700861-36716997 Glycine max
Glyma.16G207200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 36700861-36705860 Glycine max
Glyma.16G207200 5.0kb downstream 5.0kb downstream 16137 true Chr16: 36705861-36721997 Glycine max
Glyma.16G207200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 36716998-36721997 Glycine max
Glyma.16G207200 10.0kb upstream 10.0kb upstream 21137 true Chr16: 36695861-36716997 Glycine max
Glyma.16G207200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 36695861-36705860 Glycine max
Glyma.16G207200 10.0kb downstream 10.0kb downstream 21137 true Chr16: 36705861-36726997 Glycine max
Glyma.16G207200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 36716998-36726997 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303448 5265 Fabidae View MSA
124064524 5270 Rosid View MSA
123751966 5271 Pentapetalae View MSA
122790455 5272 Eudicot View MSA
122049912 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350319 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.82569 0.0 27.3886    
cufflinks 6.55494 0.0 29.4555    
cufflinks 7.09171 0.0 31.2361   High
cufflinks 5.2891 0.0 22.2087    
cufflinks 4.98431 0.0 24.8885   Low
cufflinks 5.17485 0.0 24.8942   Low
cufflinks 6.81144 0.0 30.8447   High
cufflinks 5.67449 0.0 26.7929    
cufflinks 6.38476 0.0 32.4164    
cufflinks 0.207        
cufflinks 0.136       Low
cufflinks 0.249        
cufflinks 0.243        
cufflinks 0.3        
cufflinks 0.235        
cufflinks 0.447       High
cufflinks 0.153       Low
cufflinks 0.345        
cufflinks 0.267        
cufflinks 0.598       High
cufflinks 0.174        
cufflinks 0.56       High
cufflinks 0.401        
cufflinks 0.14       Low
cufflinks 0.565       High
cufflinks 0.147       Low

0 Strain