Gene : Glyma.16G193200 G. max Wm82.a2.v1
Defline:  (1 of 4) PF07918 - CAP160 repeat (CAP160) Genomic Order:  1932
Name:  ? Glyma.16G193200 Secondary Identifier:  ? PAC:30561990
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.16G193200 0.5kb upstream 0.5kb upstream 2609 true Chr16: 35545233-35547841 Glycine max
Glyma.16G193200 0.5kb upstream 0.5kb upstream 500 false Chr16: 35545233-35545732 Glycine max
Glyma.16G193200 0.5kb downstream 0.5kb downstream 2609 true Chr16: 35545733-35548341 Glycine max
Glyma.16G193200 0.5kb downstream 0.5kb downstream 500 false Chr16: 35547842-35548341 Glycine max
Glyma.16G193200 1.0kb upstream 1.0kb upstream 3109 true Chr16: 35544733-35547841 Glycine max
Glyma.16G193200 1.0kb upstream 1.0kb upstream 1000 false Chr16: 35544733-35545732 Glycine max
Glyma.16G193200 1.0kb downstream 1.0kb downstream 3109 true Chr16: 35545733-35548841 Glycine max
Glyma.16G193200 1.0kb downstream 1.0kb downstream 1000 false Chr16: 35547842-35548841 Glycine max
Glyma.16G193200 2.0kb upstream 2.0kb upstream 4109 true Chr16: 35543733-35547841 Glycine max
Glyma.16G193200 2.0kb upstream 2.0kb upstream 2000 false Chr16: 35543733-35545732 Glycine max
Glyma.16G193200 2.0kb downstream 2.0kb downstream 4109 true Chr16: 35545733-35549841 Glycine max
Glyma.16G193200 2.0kb downstream 2.0kb downstream 2000 false Chr16: 35547842-35549841 Glycine max
Glyma.16G193200 5.0kb upstream 5.0kb upstream 7109 true Chr16: 35540733-35547841 Glycine max
Glyma.16G193200 5.0kb upstream 5.0kb upstream 5000 false Chr16: 35540733-35545732 Glycine max
Glyma.16G193200 5.0kb downstream 5.0kb downstream 7109 true Chr16: 35545733-35552841 Glycine max
Glyma.16G193200 5.0kb downstream 5.0kb downstream 5000 false Chr16: 35547842-35552841 Glycine max
Glyma.16G193200 10.0kb upstream 10.0kb upstream 12109 true Chr16: 35535733-35547841 Glycine max
Glyma.16G193200 10.0kb upstream 10.0kb upstream 10000 false Chr16: 35535733-35545732 Glycine max
Glyma.16G193200 10.0kb downstream 10.0kb downstream 12109 true Chr16: 35545733-35557841 Glycine max
Glyma.16G193200 10.0kb downstream 10.0kb downstream 10000 false Chr16: 35547842-35557841 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121615470 5273 Angiosperm View MSA
122250434 5265 Fabidae View MSA
123993637 5270 Rosid View MSA
123568389 5271 Pentapetalae View MSA
122603134 5272 Eudicot View MSA
120887661 5274 Embryophyte View MSA
122928415 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0855387 0.0 0.345176 Low  
cufflinks 0.729168 0.0 2.6903   High
cufflinks 0.0784261 0.0 0.317217 Low  
cufflinks 0.160328 0.0 0.631319 Low  
cufflinks 0.019092 0.0 0.0855923 Low  
cufflinks 0.0157243 0.0 0.0719737 Low Low
cufflinks 0.0205131 0.0 0.0914089 Low  
cufflinks 0.163328 0.0 0.6424 Low  
cufflinks 0.024563 0.0 0.107675 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.124       High
cufflinks 0.275       High
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain