Gene : Glyma.17G003600 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN Genomic Order:  36
Name:  ? Glyma.17G003600 Secondary Identifier:  ? PAC:30480305
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G003600 0.5kb upstream 0.5kb upstream 4267   true Chr17: 386468-390734 Glycine max
Glyma.17G003600 0.5kb upstream 0.5kb upstream 500   false Chr17: 390235-390734 Glycine max
Glyma.17G003600 0.5kb downstream 0.5kb downstream 4267   true Chr17: 385968-390234 Glycine max
Glyma.17G003600 0.5kb downstream 0.5kb downstream 500   false Chr17: 385968-386467 Glycine max
Glyma.17G003600 1.0kb upstream 1.0kb upstream 4767   true Chr17: 386468-391234 Glycine max
Glyma.17G003600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 390235-391234 Glycine max
Glyma.17G003600 1.0kb downstream 1.0kb downstream 4767   true Chr17: 385468-390234 Glycine max
Glyma.17G003600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 385468-386467 Glycine max
Glyma.17G003600 2.0kb upstream 2.0kb upstream 5767   true Chr17: 386468-392234 Glycine max
Glyma.17G003600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 390235-392234 Glycine max
Glyma.17G003600 2.0kb downstream 2.0kb downstream 5767   true Chr17: 384468-390234 Glycine max
Glyma.17G003600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 384468-386467 Glycine max
Glyma.17G003600 5.0kb upstream 5.0kb upstream 8767   true Chr17: 386468-395234 Glycine max
Glyma.17G003600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 390235-395234 Glycine max
Glyma.17G003600 5.0kb downstream 5.0kb downstream 8767   true Chr17: 381468-390234 Glycine max
Glyma.17G003600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 381468-386467 Glycine max
Glyma.17G003600 10.0kb upstream 10.0kb upstream 13767   true Chr17: 386468-400234 Glycine max
Glyma.17G003600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 390235-400234 Glycine max
Glyma.17G003600 10.0kb downstream 10.0kb downstream 13767   true Chr17: 376468-390234 Glycine max
Glyma.17G003600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 376468-386467 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041408 5273 Angiosperm View MSA
122255209 5265 Fabidae View MSA
124065588 5270 Rosid View MSA
123745758 5271 Pentapetalae View MSA
122795577 5272 Eudicot View MSA
121348063 5274 Embryophyte View MSA
123428605 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.3488 0.0 55.0864   Low
cufflinks 16.4569 0.0 56.0479    
cufflinks 19.7324 0.0 82.6556    
cufflinks 18.4765 0.0 77.5659    
cufflinks 15.8328 0.0 66.119    
cufflinks 23.1509 0.0 97.5048 High High
cufflinks 15.3514 0.0 64.2945    
cufflinks 20.7308 0.0 88.2651    
cufflinks 18.5809 0.0 71.4129    
cufflinks 2.526        
cufflinks 1.321       Low
cufflinks 3.209       High
cufflinks 3.327       High
cufflinks 3.239       High
cufflinks 1.529       Low
cufflinks 2.597        
cufflinks 1.383       Low
cufflinks 3.409       High
cufflinks 2.701        
cufflinks 2.404        
cufflinks 1.332       Low
cufflinks 2.565        
cufflinks 2.484        
cufflinks 1.828        
cufflinks 2.451        
cufflinks 1.518       Low

0 Strain