Gene : Glyma.17G023900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10168:SF115 - MONOTHIOL GLUTAREDOXIN-S2-RELATED Genomic Order:  239
Name:  ? Glyma.17G023900 Secondary Identifier:  ? PAC:30478680
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax THIOREDOX-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G023900 0.5kb upstream 0.5kb upstream 1435   true Chr17: 1742281-1743715 Glycine max
Glyma.17G023900 0.5kb upstream 0.5kb upstream 500   false Chr17: 1742281-1742780 Glycine max
Glyma.17G023900 0.5kb downstream 0.5kb downstream 1435   true Chr17: 1742781-1744215 Glycine max
Glyma.17G023900 0.5kb downstream 0.5kb downstream 500   false Chr17: 1743716-1744215 Glycine max
Glyma.17G023900 1.0kb upstream 1.0kb upstream 1935   true Chr17: 1741781-1743715 Glycine max
Glyma.17G023900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 1741781-1742780 Glycine max
Glyma.17G023900 1.0kb downstream 1.0kb downstream 1935   true Chr17: 1742781-1744715 Glycine max
Glyma.17G023900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 1743716-1744715 Glycine max
Glyma.17G023900 2.0kb upstream 2.0kb upstream 2935   true Chr17: 1740781-1743715 Glycine max
Glyma.17G023900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 1740781-1742780 Glycine max
Glyma.17G023900 2.0kb downstream 2.0kb downstream 2935   true Chr17: 1742781-1745715 Glycine max
Glyma.17G023900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 1743716-1745715 Glycine max
Glyma.17G023900 5.0kb upstream 5.0kb upstream 5935   true Chr17: 1737781-1743715 Glycine max
Glyma.17G023900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 1737781-1742780 Glycine max
Glyma.17G023900 5.0kb downstream 5.0kb downstream 5935   true Chr17: 1742781-1748715 Glycine max
Glyma.17G023900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 1743716-1748715 Glycine max
Glyma.17G023900 10.0kb upstream 10.0kb upstream 10935   true Chr17: 1732781-1743715 Glycine max
Glyma.17G023900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 1732781-1742780 Glycine max
Glyma.17G023900 10.0kb downstream 10.0kb downstream 10935   true Chr17: 1742781-1753715 Glycine max
Glyma.17G023900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 1743716-1753715 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310406 5265 Fabidae View MSA
124065787 5270 Rosid View MSA
123750086 5271 Pentapetalae View MSA
122796200 5272 Eudicot View MSA
122047042 5273 Angiosperm View MSA
121349593 5274 Embryophyte View MSA
123381368 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.81969 0.0 6.62651    
cufflinks 0.812861 0.0 3.07806    
cufflinks 104.99 0.0 290.085 High High
cufflinks 0.637414 0.0 2.43941    
cufflinks 0.0584351 0.0 0.252318 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.429104 0.0 1.6702    
cufflinks 0.397905 0.0 1.55322    
cufflinks 0.171        
cufflinks 1.084        
cufflinks 89.436     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.901        
cufflinks 0.015     Low Low
cufflinks 26.361     High High
cufflinks 0.509        
cufflinks 14.405     High  
cufflinks 0.51        
cufflinks 4.594        
cufflinks 1.268        
cufflinks 0.283        
cufflinks 11.166     High  
cufflinks 0.056     Low Low

0 Strain