Gene : Glyma.17G025300 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11064//PTHR11064:SF34 - CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED Genomic Order:  253
Name:  ? Glyma.17G025300 Secondary Identifier:  ? PAC:30480721
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G025300 0.5kb upstream 0.5kb upstream 872   true Chr17: 1857710-1858581 Glycine max
Glyma.17G025300 0.5kb upstream 0.5kb upstream 500   false Chr17: 1858082-1858581 Glycine max
Glyma.17G025300 0.5kb downstream 0.5kb downstream 872   true Chr17: 1857210-1858081 Glycine max
Glyma.17G025300 0.5kb downstream 0.5kb downstream 500   false Chr17: 1857210-1857709 Glycine max
Glyma.17G025300 1.0kb upstream 1.0kb upstream 1372   true Chr17: 1857710-1859081 Glycine max
Glyma.17G025300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 1858082-1859081 Glycine max
Glyma.17G025300 1.0kb downstream 1.0kb downstream 1372   true Chr17: 1856710-1858081 Glycine max
Glyma.17G025300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 1856710-1857709 Glycine max
Glyma.17G025300 2.0kb upstream 2.0kb upstream 2372   true Chr17: 1857710-1860081 Glycine max
Glyma.17G025300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 1858082-1860081 Glycine max
Glyma.17G025300 2.0kb downstream 2.0kb downstream 2372   true Chr17: 1855710-1858081 Glycine max
Glyma.17G025300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 1855710-1857709 Glycine max
Glyma.17G025300 5.0kb upstream 5.0kb upstream 5372   true Chr17: 1857710-1863081 Glycine max
Glyma.17G025300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 1858082-1863081 Glycine max
Glyma.17G025300 5.0kb downstream 5.0kb downstream 5372   true Chr17: 1852710-1858081 Glycine max
Glyma.17G025300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 1852710-1857709 Glycine max
Glyma.17G025300 10.0kb upstream 10.0kb upstream 10372   true Chr17: 1857710-1868081 Glycine max
Glyma.17G025300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 1858082-1868081 Glycine max
Glyma.17G025300 10.0kb downstream 10.0kb downstream 10372   true Chr17: 1847710-1858081 Glycine max
Glyma.17G025300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 1847710-1857709 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041139 5273 Angiosperm View MSA
122315080 5265 Fabidae View MSA
124070521 5270 Rosid View MSA
123747842 5271 Pentapetalae View MSA
122796503 5272 Eudicot View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.148456 0.0 0.641023 Low  
cufflinks 0.525242 0.0 2.10856    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.58645 0.0 9.73257   High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.775       High
cufflinks 0.043     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.13        
cufflinks 0.306        
cufflinks 0.05     Low Low
cufflinks 0.92       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.046     Low Low
cufflinks 0.32        
cufflinks 0.171        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.464        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.412        

0 Strain