Gene : Glyma.17G028600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31707:SF13 - PECTINESTERASE/PECTINESTERASE INHIBITOR 21-RELATED Genomic Order:  286
Name:  ? Glyma.17G028600 Secondary Identifier:  ? PAC:30482047
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G028600 0.5kb upstream 0.5kb upstream 3415   true Chr17: 2126207-2129621 Glycine max
Glyma.17G028600 0.5kb upstream 0.5kb upstream 500   false Chr17: 2129122-2129621 Glycine max
Glyma.17G028600 0.5kb downstream 0.5kb downstream 3415   true Chr17: 2125707-2129121 Glycine max
Glyma.17G028600 0.5kb downstream 0.5kb downstream 500   false Chr17: 2125707-2126206 Glycine max
Glyma.17G028600 1.0kb upstream 1.0kb upstream 3915   true Chr17: 2126207-2130121 Glycine max
Glyma.17G028600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2129122-2130121 Glycine max
Glyma.17G028600 1.0kb downstream 1.0kb downstream 3915   true Chr17: 2125207-2129121 Glycine max
Glyma.17G028600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2125207-2126206 Glycine max
Glyma.17G028600 2.0kb upstream 2.0kb upstream 4915   true Chr17: 2126207-2131121 Glycine max
Glyma.17G028600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2129122-2131121 Glycine max
Glyma.17G028600 2.0kb downstream 2.0kb downstream 4915   true Chr17: 2124207-2129121 Glycine max
Glyma.17G028600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2124207-2126206 Glycine max
Glyma.17G028600 5.0kb upstream 5.0kb upstream 7915   true Chr17: 2126207-2134121 Glycine max
Glyma.17G028600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2129122-2134121 Glycine max
Glyma.17G028600 5.0kb downstream 5.0kb downstream 7915   true Chr17: 2121207-2129121 Glycine max
Glyma.17G028600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2121207-2126206 Glycine max
Glyma.17G028600 10.0kb upstream 10.0kb upstream 12915   true Chr17: 2126207-2139121 Glycine max
Glyma.17G028600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2129122-2139121 Glycine max
Glyma.17G028600 10.0kb downstream 10.0kb downstream 12915   true Chr17: 2116207-2129121 Glycine max
Glyma.17G028600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2116207-2126206 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314375 5265 Fabidae View MSA
124071187 5270 Rosid View MSA
123743579 5271 Pentapetalae View MSA
122788004 5272 Eudicot View MSA
122050714 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 169.719 0.0 638.706 High High
cufflinks 0.00489 0.0 0.0235113 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00765952 0.0 0.0350822 Low  
cufflinks 0.42288 0.0 1.54956    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 31.339     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 33.464     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain