Gene : Glyma.17G020400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13832:SF267 - PROTEIN PHOSPHATASE 1K, MITOCHONDRIAL Genomic Order:  204
Name:  ? Glyma.17G020400 Secondary Identifier:  ? PAC:30480423
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G020400 0.5kb upstream 0.5kb upstream 4150   true Chr17: 1513219-1517368 Glycine max
Glyma.17G020400 0.5kb upstream 0.5kb upstream 500   false Chr17: 1513219-1513718 Glycine max
Glyma.17G020400 0.5kb downstream 0.5kb downstream 4150   true Chr17: 1513719-1517868 Glycine max
Glyma.17G020400 0.5kb downstream 0.5kb downstream 500   false Chr17: 1517369-1517868 Glycine max
Glyma.17G020400 1.0kb upstream 1.0kb upstream 4650   true Chr17: 1512719-1517368 Glycine max
Glyma.17G020400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 1512719-1513718 Glycine max
Glyma.17G020400 1.0kb downstream 1.0kb downstream 4650   true Chr17: 1513719-1518368 Glycine max
Glyma.17G020400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 1517369-1518368 Glycine max
Glyma.17G020400 2.0kb upstream 2.0kb upstream 5650   true Chr17: 1511719-1517368 Glycine max
Glyma.17G020400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 1511719-1513718 Glycine max
Glyma.17G020400 2.0kb downstream 2.0kb downstream 5650   true Chr17: 1513719-1519368 Glycine max
Glyma.17G020400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 1517369-1519368 Glycine max
Glyma.17G020400 5.0kb upstream 5.0kb upstream 8650   true Chr17: 1508719-1517368 Glycine max
Glyma.17G020400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 1508719-1513718 Glycine max
Glyma.17G020400 5.0kb downstream 5.0kb downstream 8650   true Chr17: 1513719-1522368 Glycine max
Glyma.17G020400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 1517369-1522368 Glycine max
Glyma.17G020400 10.0kb upstream 10.0kb upstream 13650   true Chr17: 1503719-1517368 Glycine max
Glyma.17G020400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 1503719-1513718 Glycine max
Glyma.17G020400 10.0kb downstream 10.0kb downstream 13650   true Chr17: 1513719-1527368 Glycine max
Glyma.17G020400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 1517369-1527368 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297265 5265 Fabidae View MSA
124042708 5270 Rosid View MSA
123742743 5271 Pentapetalae View MSA
122796398 5272 Eudicot View MSA
122046531 5273 Angiosperm View MSA
121348551 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.03597 0.0 9.34587    
cufflinks 3.21679 0.0 9.8312    
cufflinks 1.90772 0.0 6.25287   Low
cufflinks 2.87362 0.0 8.91553    
cufflinks 2.27896 0.0 7.31408    
cufflinks 1.55697 0.0 5.24566   Low
cufflinks 3.04368 0.0 9.38176    
cufflinks 2.96562 0.0 9.1458    
cufflinks 2.32916 0.0 7.43913    
cufflinks 1.226        
cufflinks 0.333       Low
cufflinks 1.821        
cufflinks 1.725        
cufflinks 1.173        
cufflinks 0.233       Low
cufflinks 1.654        
cufflinks 0.61        
cufflinks 1.919        
cufflinks 2.22       High
cufflinks 1.962        
cufflinks 0.327       Low
cufflinks 2.257       High
cufflinks 1.498        
cufflinks 0.559        
cufflinks 1.709        
cufflinks 0.458       Low

0 Strain