Gene : Glyma.17G022300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10799//PTHR10799:SF783 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED Genomic Order:  223
Name:  ? Glyma.17G022300 Secondary Identifier:  ? PAC:30480827
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G022300 0.5kb upstream 0.5kb upstream 24440   true Chr17: 1612556-1636995 Glycine max
Glyma.17G022300 0.5kb upstream 0.5kb upstream 500   false Chr17: 1636496-1636995 Glycine max
Glyma.17G022300 0.5kb downstream 0.5kb downstream 24440   true Chr17: 1612056-1636495 Glycine max
Glyma.17G022300 0.5kb downstream 0.5kb downstream 500   false Chr17: 1612056-1612555 Glycine max
Glyma.17G022300 1.0kb upstream 1.0kb upstream 24940   true Chr17: 1612556-1637495 Glycine max
Glyma.17G022300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 1636496-1637495 Glycine max
Glyma.17G022300 1.0kb downstream 1.0kb downstream 24940   true Chr17: 1611556-1636495 Glycine max
Glyma.17G022300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 1611556-1612555 Glycine max
Glyma.17G022300 2.0kb upstream 2.0kb upstream 25940   true Chr17: 1612556-1638495 Glycine max
Glyma.17G022300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 1636496-1638495 Glycine max
Glyma.17G022300 2.0kb downstream 2.0kb downstream 25940   true Chr17: 1610556-1636495 Glycine max
Glyma.17G022300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 1610556-1612555 Glycine max
Glyma.17G022300 5.0kb upstream 5.0kb upstream 28940   true Chr17: 1612556-1641495 Glycine max
Glyma.17G022300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 1636496-1641495 Glycine max
Glyma.17G022300 5.0kb downstream 5.0kb downstream 28940   true Chr17: 1607556-1636495 Glycine max
Glyma.17G022300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 1607556-1612555 Glycine max
Glyma.17G022300 10.0kb upstream 10.0kb upstream 33940   true Chr17: 1612556-1646495 Glycine max
Glyma.17G022300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 1636496-1646495 Glycine max
Glyma.17G022300 10.0kb downstream 10.0kb downstream 33940   true Chr17: 1602556-1636495 Glycine max
Glyma.17G022300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 1602556-1612555 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309678 5265 Fabidae View MSA
124062912 5270 Rosid View MSA
123737195 5271 Pentapetalae View MSA
122791626 5272 Eudicot View MSA
122049865 5273 Angiosperm View MSA
121348487 5274 Embryophyte View MSA
123427983 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.5463 0.0 45.5413    
cufflinks 10.5888 0.0 40.4998    
cufflinks 13.6716 0.0 58.8643   High
cufflinks 10.3546 0.0 39.5732    
cufflinks 7.86865 0.0 33.5724    
cufflinks 5.77992 0.0 21.684   Low
cufflinks 12.7852 0.0 52.2345    
cufflinks 7.89946 0.0 27.7895    
cufflinks 10.1772 0.0 38.5353    
cufflinks 2.185        
cufflinks 2.142        
cufflinks 2.969        
cufflinks 1.925       Low
cufflinks 1.938       Low
cufflinks 2.514        
cufflinks 3.639       High
cufflinks 1.518       Low
cufflinks 3.352        
cufflinks 3.687       High
cufflinks 3.797       High
cufflinks 2.207        
cufflinks 3.944       High
cufflinks 2.7        
cufflinks 2.295        
cufflinks 3.712       High
cufflinks 2.702        

0 Strain