Gene : Glyma.17G011500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13683//PTHR13683:SF364 - ASPARTYL PROTEASES Genomic Order:  115
Name:  ? Glyma.17G011500 Secondary Identifier:  ? PAC:30478742
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G011500 0.5kb upstream 0.5kb upstream 5243   true Chr17: 910804-916046 Glycine max
Glyma.17G011500 0.5kb upstream 0.5kb upstream 500   false Chr17: 910804-911303 Glycine max
Glyma.17G011500 0.5kb downstream 0.5kb downstream 5243   true Chr17: 911304-916546 Glycine max
Glyma.17G011500 0.5kb downstream 0.5kb downstream 500   false Chr17: 916047-916546 Glycine max
Glyma.17G011500 1.0kb upstream 1.0kb upstream 5743   true Chr17: 910304-916046 Glycine max
Glyma.17G011500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 910304-911303 Glycine max
Glyma.17G011500 1.0kb downstream 1.0kb downstream 5743   true Chr17: 911304-917046 Glycine max
Glyma.17G011500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 916047-917046 Glycine max
Glyma.17G011500 2.0kb upstream 2.0kb upstream 6743   true Chr17: 909304-916046 Glycine max
Glyma.17G011500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 909304-911303 Glycine max
Glyma.17G011500 2.0kb downstream 2.0kb downstream 6743   true Chr17: 911304-918046 Glycine max
Glyma.17G011500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 916047-918046 Glycine max
Glyma.17G011500 5.0kb upstream 5.0kb upstream 9743   true Chr17: 906304-916046 Glycine max
Glyma.17G011500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 906304-911303 Glycine max
Glyma.17G011500 5.0kb downstream 5.0kb downstream 9743   true Chr17: 911304-921046 Glycine max
Glyma.17G011500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 916047-921046 Glycine max
Glyma.17G011500 10.0kb upstream 10.0kb upstream 14743   true Chr17: 901304-916046 Glycine max
Glyma.17G011500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 901304-911303 Glycine max
Glyma.17G011500 10.0kb downstream 10.0kb downstream 14743   true Chr17: 911304-926046 Glycine max
Glyma.17G011500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 916047-926046 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122795495 5272 Eudicot View MSA
122312580 5265 Fabidae View MSA
124069001 5270 Rosid View MSA
123750418 5271 Pentapetalae View MSA
122045248 5273 Angiosperm View MSA
121346712 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.2661 0.0 59.112    
cufflinks 16.0725 0.0 47.6984    
cufflinks 35.9815 0.0 135.045 High  
cufflinks 42.6587 0.0 168.854 High  
cufflinks 6.39122 0.0 24.3735    
cufflinks 2.76882 0.0 14.3934   Low
cufflinks 92.578 0.0 398.749 High High
cufflinks 18.4603 0.0 63.538    
cufflinks 7.79651 0.0 24.4385    
cufflinks 4.664        
cufflinks 1.334       Low
cufflinks 7.49     High High
cufflinks 1.739        
cufflinks 1.116       Low
cufflinks 1.787        
cufflinks 2.78        
cufflinks 2.266        
cufflinks 9.432     High High
cufflinks 5.327       High
cufflinks 2.713        
cufflinks 1.652        
cufflinks 3.02        
cufflinks 2.522        
cufflinks 1.389       Low
cufflinks 2.783        
cufflinks 1.636        

0 Strain