Gene : Glyma.17G012600 G. max Wm82.a2.v1
Defline:  (1 of 6) 4.2.1.51//4.2.1.91 - Arogenate dehydratase / Carboxycyclohexadienyl dehydratase Genomic Order:  126
Name:  ? Glyma.17G012600 Secondary Identifier:  ? PAC:30478470
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3462 Glycine max pathologic  
Gmax PWY-3481 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G012600 0.5kb upstream 0.5kb upstream 8255   true Chr17: 970004-978258 Glycine max
Glyma.17G012600 0.5kb upstream 0.5kb upstream 500   false Chr17: 977759-978258 Glycine max
Glyma.17G012600 0.5kb downstream 0.5kb downstream 8255   true Chr17: 969504-977758 Glycine max
Glyma.17G012600 0.5kb downstream 0.5kb downstream 500   false Chr17: 969504-970003 Glycine max
Glyma.17G012600 1.0kb upstream 1.0kb upstream 8755   true Chr17: 970004-978758 Glycine max
Glyma.17G012600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 977759-978758 Glycine max
Glyma.17G012600 1.0kb downstream 1.0kb downstream 8755   true Chr17: 969004-977758 Glycine max
Glyma.17G012600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 969004-970003 Glycine max
Glyma.17G012600 2.0kb upstream 2.0kb upstream 9755   true Chr17: 970004-979758 Glycine max
Glyma.17G012600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 977759-979758 Glycine max
Glyma.17G012600 2.0kb downstream 2.0kb downstream 9755   true Chr17: 968004-977758 Glycine max
Glyma.17G012600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 968004-970003 Glycine max
Glyma.17G012600 5.0kb upstream 5.0kb upstream 12755   true Chr17: 970004-982758 Glycine max
Glyma.17G012600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 977759-982758 Glycine max
Glyma.17G012600 5.0kb downstream 5.0kb downstream 12755   true Chr17: 965004-977758 Glycine max
Glyma.17G012600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 965004-970003 Glycine max
Glyma.17G012600 10.0kb upstream 10.0kb upstream 17755   true Chr17: 970004-987758 Glycine max
Glyma.17G012600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 977759-987758 Glycine max
Glyma.17G012600 10.0kb downstream 10.0kb downstream 17755   true Chr17: 960004-977758 Glycine max
Glyma.17G012600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 960004-970003 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305741 5265 Fabidae View MSA
124070926 5270 Rosid View MSA
123746635 5271 Pentapetalae View MSA
122795634 5272 Eudicot View MSA
122042719 5273 Angiosperm View MSA
121351398 5274 Embryophyte View MSA
123427097 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.527126 0.0 3.19859   Low
cufflinks 1.9435 0.0 9.18273    
cufflinks 0.703329 0.0 3.09932   Low
cufflinks 1.77406 0.0 10.4934    
cufflinks 1.87582 0.0 9.06201    
cufflinks 5.49871 0.0 22.0656   High
cufflinks 2.37409 0.0 12.4812    
cufflinks 1.51287 0.0 7.74222    
cufflinks 4.4381 0.0 18.7336   High
cufflinks 0.154        
cufflinks 0.043     Low Low
cufflinks 0.093     Low  
cufflinks 0.227       High
cufflinks 0.123        
cufflinks 0.314       High
cufflinks 0.123        
cufflinks 0.104        
cufflinks 0.163        
cufflinks 0.191        
cufflinks 0.134        
cufflinks 0.066       Low
cufflinks 0.156        
cufflinks 0.231       High
cufflinks 0.099        
cufflinks 0.166        
cufflinks 0.113        

0 Strain