Gene : Glyma.17G053200 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR24031:SF294 - EUKARYOTIC INITIATION FACTOR 4A-1-RELATED Genomic Order:  532
Name:  ? Glyma.17G053200 Secondary Identifier:  ? PAC:30479400
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G053200 0.5kb upstream 0.5kb upstream 3380   true Chr17: 4047069-4050448 Glycine max
Glyma.17G053200 0.5kb upstream 0.5kb upstream 500   false Chr17: 4047069-4047568 Glycine max
Glyma.17G053200 0.5kb downstream 0.5kb downstream 3380   true Chr17: 4047569-4050948 Glycine max
Glyma.17G053200 0.5kb downstream 0.5kb downstream 500   false Chr17: 4050449-4050948 Glycine max
Glyma.17G053200 1.0kb upstream 1.0kb upstream 3880   true Chr17: 4046569-4050448 Glycine max
Glyma.17G053200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4046569-4047568 Glycine max
Glyma.17G053200 1.0kb downstream 1.0kb downstream 3880   true Chr17: 4047569-4051448 Glycine max
Glyma.17G053200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4050449-4051448 Glycine max
Glyma.17G053200 2.0kb upstream 2.0kb upstream 4880   true Chr17: 4045569-4050448 Glycine max
Glyma.17G053200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4045569-4047568 Glycine max
Glyma.17G053200 2.0kb downstream 2.0kb downstream 4880   true Chr17: 4047569-4052448 Glycine max
Glyma.17G053200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4050449-4052448 Glycine max
Glyma.17G053200 5.0kb upstream 5.0kb upstream 7880   true Chr17: 4042569-4050448 Glycine max
Glyma.17G053200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4042569-4047568 Glycine max
Glyma.17G053200 5.0kb downstream 5.0kb downstream 7880   true Chr17: 4047569-4055448 Glycine max
Glyma.17G053200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4050449-4055448 Glycine max
Glyma.17G053200 10.0kb upstream 10.0kb upstream 12880   true Chr17: 4037569-4050448 Glycine max
Glyma.17G053200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4037569-4047568 Glycine max
Glyma.17G053200 10.0kb downstream 10.0kb downstream 12880   true Chr17: 4047569-4060448 Glycine max
Glyma.17G053200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4050449-4060448 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315314 5265 Fabidae View MSA
124071119 5270 Rosid View MSA
123753006 5271 Pentapetalae View MSA
122788239 5272 Eudicot View MSA
122046690 5273 Angiosperm View MSA
121345295 5274 Embryophyte View MSA
123427522 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.1384 0.0 95.6548 High  
cufflinks 53.8119 0.0 152.274 High  
cufflinks 28.4791 0.0 76.7032 High Low
cufflinks 36.9739 0.0 101.027 High  
cufflinks 70.4257 0.0 206.504 High High
cufflinks 52.3336 0.0 147.797 High  
cufflinks 60.9374 0.0 175.089 High High
cufflinks 42.2291 0.0 116.759 High  
cufflinks 45.7789 0.0 127.456 High  
cufflinks 23.156     High  
cufflinks 5.977     High Low
cufflinks 20.827     High  
cufflinks 45.827     High High
cufflinks 61.668     High High
cufflinks 9.564     High Low
cufflinks 19.886     High  
cufflinks 19.95     High  
cufflinks 24.691     High  
cufflinks 31.102     High  
cufflinks 15.399     High  
cufflinks 11.628     High  
cufflinks 17.538     High  
cufflinks 27.292     High  
cufflinks 7.681     High Low
cufflinks 16.41     High  
cufflinks 9.44     High Low

0 Strain