Gene : Glyma.17G054500 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR13878//PTHR13878:SF14 - GULONOLACTONE OXIDASE Genomic Order:  545
Name:  ? Glyma.17G054500 Secondary Identifier:  ? PAC:30480076
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G054500 0.5kb upstream 0.5kb upstream 4749   true Chr17: 4142938-4147686 Glycine max
Glyma.17G054500 0.5kb upstream 0.5kb upstream 500   false Chr17: 4142938-4143437 Glycine max
Glyma.17G054500 0.5kb downstream 0.5kb downstream 4749   true Chr17: 4143438-4148186 Glycine max
Glyma.17G054500 0.5kb downstream 0.5kb downstream 500   false Chr17: 4147687-4148186 Glycine max
Glyma.17G054500 1.0kb upstream 1.0kb upstream 5249   true Chr17: 4142438-4147686 Glycine max
Glyma.17G054500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4142438-4143437 Glycine max
Glyma.17G054500 1.0kb downstream 1.0kb downstream 5249   true Chr17: 4143438-4148686 Glycine max
Glyma.17G054500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4147687-4148686 Glycine max
Glyma.17G054500 2.0kb upstream 2.0kb upstream 6249   true Chr17: 4141438-4147686 Glycine max
Glyma.17G054500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4141438-4143437 Glycine max
Glyma.17G054500 2.0kb downstream 2.0kb downstream 6249   true Chr17: 4143438-4149686 Glycine max
Glyma.17G054500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4147687-4149686 Glycine max
Glyma.17G054500 5.0kb upstream 5.0kb upstream 9249   true Chr17: 4138438-4147686 Glycine max
Glyma.17G054500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4138438-4143437 Glycine max
Glyma.17G054500 5.0kb downstream 5.0kb downstream 9249   true Chr17: 4143438-4152686 Glycine max
Glyma.17G054500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4147687-4152686 Glycine max
Glyma.17G054500 10.0kb upstream 10.0kb upstream 14249   true Chr17: 4133438-4147686 Glycine max
Glyma.17G054500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4133438-4143437 Glycine max
Glyma.17G054500 10.0kb downstream 10.0kb downstream 14249   true Chr17: 4143438-4157686 Glycine max
Glyma.17G054500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4147687-4157686 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314246 5265 Fabidae View MSA
124067261 5270 Rosid View MSA
123742182 5271 Pentapetalae View MSA
122770229 5272 Eudicot View MSA
122051294 5273 Angiosperm View MSA
121312401 5274 Embryophyte View MSA
123349577 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0701488 0.0 0.279223 Low Low
cufflinks 2.97071 0.0 8.96639    
cufflinks 15.8904 0.0 42.4238    
cufflinks 7.66449 0.0 20.8659    
cufflinks 5.79988 0.0 16.1706    
cufflinks 0.873303 0.0 3.07032    
cufflinks 1.0805 0.0 3.73309    
cufflinks 0.680217 0.0 2.43432    
cufflinks 47.9545 0.0 138.427 High High
cufflinks 0.011     Low Low
cufflinks 0.199        
cufflinks 8.438     High High
cufflinks 0.701        
cufflinks 0.069     Low Low
cufflinks 15.485     High High
cufflinks 0.321        
cufflinks 0.128        
cufflinks 4.674       High
cufflinks 1.377        
cufflinks 0.261        
cufflinks 1.072        
cufflinks 0.304        
cufflinks 2.357        
cufflinks 0.338        
cufflinks 0.058     Low Low
cufflinks 1.237        

0 Strain