Gene : Glyma.17G054900 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG4452 - Predicted membrane protein Genomic Order:  549
Name:  ? Glyma.17G054900 Secondary Identifier:  ? PAC:30480705
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G054900 0.5kb upstream 0.5kb upstream 2861   true Chr17: 4171748-4174608 Glycine max
Glyma.17G054900 0.5kb upstream 0.5kb upstream 500   false Chr17: 4171748-4172247 Glycine max
Glyma.17G054900 0.5kb downstream 0.5kb downstream 2861   true Chr17: 4172248-4175108 Glycine max
Glyma.17G054900 0.5kb downstream 0.5kb downstream 500   false Chr17: 4174609-4175108 Glycine max
Glyma.17G054900 1.0kb upstream 1.0kb upstream 3361   true Chr17: 4171248-4174608 Glycine max
Glyma.17G054900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4171248-4172247 Glycine max
Glyma.17G054900 1.0kb downstream 1.0kb downstream 3361   true Chr17: 4172248-4175608 Glycine max
Glyma.17G054900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4174609-4175608 Glycine max
Glyma.17G054900 2.0kb upstream 2.0kb upstream 4361   true Chr17: 4170248-4174608 Glycine max
Glyma.17G054900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4170248-4172247 Glycine max
Glyma.17G054900 2.0kb downstream 2.0kb downstream 4361   true Chr17: 4172248-4176608 Glycine max
Glyma.17G054900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4174609-4176608 Glycine max
Glyma.17G054900 5.0kb upstream 5.0kb upstream 7361   true Chr17: 4167248-4174608 Glycine max
Glyma.17G054900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4167248-4172247 Glycine max
Glyma.17G054900 5.0kb downstream 5.0kb downstream 7361   true Chr17: 4172248-4179608 Glycine max
Glyma.17G054900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4174609-4179608 Glycine max
Glyma.17G054900 10.0kb upstream 10.0kb upstream 12361   true Chr17: 4162248-4174608 Glycine max
Glyma.17G054900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4162248-4172247 Glycine max
Glyma.17G054900 10.0kb downstream 10.0kb downstream 12361   true Chr17: 4172248-4184608 Glycine max
Glyma.17G054900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4174609-4184608 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312159 5265 Fabidae View MSA
124072818 5270 Rosid View MSA
123745362 5271 Pentapetalae View MSA
122797533 5272 Eudicot View MSA
122042429 5273 Angiosperm View MSA
121343951 5274 Embryophyte View MSA
123425665 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.886 0.0 129.568 High  
cufflinks 28.7998 0.0 111.013 High  
cufflinks 18.606 0.0 61.8262   Low
cufflinks 30.0552 0.0 92.3772 High  
cufflinks 48.6508 0.0 179.536 High High
cufflinks 41.0817 0.0 123.657 High  
cufflinks 41.2511 0.0 156.87 High  
cufflinks 41.161 0.0 123.681 High  
cufflinks 40.0949 0.0 120.641 High  
cufflinks 5.603        
cufflinks 1.45       Low
cufflinks 3.44        
cufflinks 7.932     High High
cufflinks 11.129     High High
cufflinks 2.45        
cufflinks 3.649        
cufflinks 2.779        
cufflinks 4.793        
cufflinks 4.605        
cufflinks 3.623        
cufflinks 2.473        
cufflinks 3.708        
cufflinks 4.036        
cufflinks 2.138       Low
cufflinks 3.614        
cufflinks 3.812        

0 Strain