Gene : Glyma.17G055500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12732 - UNCHARACTERIZED PROTEASOME COMPONENT REGION PCI-CONTAINING Genomic Order:  555
Name:  ? Glyma.17G055500 Secondary Identifier:  ? PAC:30479404
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G055500 0.5kb upstream 0.5kb upstream 5442   true Chr17: 4217660-4223101 Glycine max
Glyma.17G055500 0.5kb upstream 0.5kb upstream 500   false Chr17: 4222602-4223101 Glycine max
Glyma.17G055500 0.5kb downstream 0.5kb downstream 5442   true Chr17: 4217160-4222601 Glycine max
Glyma.17G055500 0.5kb downstream 0.5kb downstream 500   false Chr17: 4217160-4217659 Glycine max
Glyma.17G055500 1.0kb upstream 1.0kb upstream 5942   true Chr17: 4217660-4223601 Glycine max
Glyma.17G055500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4222602-4223601 Glycine max
Glyma.17G055500 1.0kb downstream 1.0kb downstream 5942   true Chr17: 4216660-4222601 Glycine max
Glyma.17G055500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4216660-4217659 Glycine max
Glyma.17G055500 2.0kb upstream 2.0kb upstream 6942   true Chr17: 4217660-4224601 Glycine max
Glyma.17G055500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4222602-4224601 Glycine max
Glyma.17G055500 2.0kb downstream 2.0kb downstream 6942   true Chr17: 4215660-4222601 Glycine max
Glyma.17G055500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4215660-4217659 Glycine max
Glyma.17G055500 5.0kb upstream 5.0kb upstream 9942   true Chr17: 4217660-4227601 Glycine max
Glyma.17G055500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4222602-4227601 Glycine max
Glyma.17G055500 5.0kb downstream 5.0kb downstream 9942   true Chr17: 4212660-4222601 Glycine max
Glyma.17G055500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4212660-4217659 Glycine max
Glyma.17G055500 10.0kb upstream 10.0kb upstream 14942   true Chr17: 4217660-4232601 Glycine max
Glyma.17G055500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4222602-4232601 Glycine max
Glyma.17G055500 10.0kb downstream 10.0kb downstream 14942   true Chr17: 4207660-4222601 Glycine max
Glyma.17G055500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4207660-4217659 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026380 5273 Angiosperm View MSA
122300195 5265 Fabidae View MSA
124065279 5270 Rosid View MSA
123739709 5271 Pentapetalae View MSA
122792868 5272 Eudicot View MSA
121343873 5274 Embryophyte View MSA
123424349 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.50584 0.0 27.6859   High
cufflinks 8.64837 0.0 27.8794   High
cufflinks 3.60845 0.0 11.2393   Low
cufflinks 6.86591 0.0 32.8711    
cufflinks 6.28024 0.0 21.7163    
cufflinks 3.74501 0.0 22.2674   Low
cufflinks 4.7358 0.0 23.9785    
cufflinks 7.23369 0.0 24.1413    
cufflinks 6.09178 0.0 21.2585    
cufflinks 0.834        
cufflinks 0.267       Low
cufflinks 0.838        
cufflinks 0.967        
cufflinks 1.2        
cufflinks 0.744        
cufflinks 1.243        
cufflinks 0.513        
cufflinks 1.137        
cufflinks 1.485       High
cufflinks 1.26        
cufflinks 0.454       Low
cufflinks 1.355        
cufflinks 1.161        
cufflinks 0.386       Low
cufflinks 1.328        
cufflinks 0.435       Low

0 Strain