Gene : Glyma.17G056300 G. max Wm82.a2.v1
Defline:  (1 of 25) KOG0484 - Transcription factor PHOX2/ARIX, contains HOX domain Genomic Order:  563
Name:  ? Glyma.17G056300 Secondary Identifier:  ? PAC:30478588
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G056300 0.5kb upstream 0.5kb upstream 1902   true Chr17: 4274022-4275923 Glycine max
Glyma.17G056300 0.5kb upstream 0.5kb upstream 500   false Chr17: 4275424-4275923 Glycine max
Glyma.17G056300 0.5kb downstream 0.5kb downstream 1902   true Chr17: 4273522-4275423 Glycine max
Glyma.17G056300 0.5kb downstream 0.5kb downstream 500   false Chr17: 4273522-4274021 Glycine max
Glyma.17G056300 1.0kb upstream 1.0kb upstream 2402   true Chr17: 4274022-4276423 Glycine max
Glyma.17G056300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4275424-4276423 Glycine max
Glyma.17G056300 1.0kb downstream 1.0kb downstream 2402   true Chr17: 4273022-4275423 Glycine max
Glyma.17G056300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4273022-4274021 Glycine max
Glyma.17G056300 2.0kb upstream 2.0kb upstream 3402   true Chr17: 4274022-4277423 Glycine max
Glyma.17G056300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4275424-4277423 Glycine max
Glyma.17G056300 2.0kb downstream 2.0kb downstream 3402   true Chr17: 4272022-4275423 Glycine max
Glyma.17G056300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4272022-4274021 Glycine max
Glyma.17G056300 5.0kb upstream 5.0kb upstream 6402   true Chr17: 4274022-4280423 Glycine max
Glyma.17G056300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4275424-4280423 Glycine max
Glyma.17G056300 5.0kb downstream 5.0kb downstream 6402   true Chr17: 4269022-4275423 Glycine max
Glyma.17G056300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4269022-4274021 Glycine max
Glyma.17G056300 10.0kb upstream 10.0kb upstream 11402   true Chr17: 4274022-4285423 Glycine max
Glyma.17G056300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4275424-4285423 Glycine max
Glyma.17G056300 10.0kb downstream 10.0kb downstream 11402   true Chr17: 4264022-4275423 Glycine max
Glyma.17G056300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4264022-4274021 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028268 5273 Angiosperm View MSA
122314518 5265 Fabidae View MSA
124050652 5270 Rosid View MSA
123752809 5271 Pentapetalae View MSA
122797048 5272 Eudicot View MSA
121351534 5274 Embryophyte View MSA
123382211 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.44471 0.0 5.24338   High
cufflinks 0.743081 0.0 2.79098    
cufflinks 1.68825 0.0 6.0471   High
cufflinks 0.224395 0.0 0.884348   Low
cufflinks 0.381744 0.0 1.47535    
cufflinks 0.96534 0.0 3.58361    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.333684 0.0 1.29487    
cufflinks 0.47377 0.0 1.81341    
cufflinks 0.082     Low Low
cufflinks 13.001     High High
cufflinks 0.677        
cufflinks 0.344        
cufflinks 0.013     Low Low
cufflinks 0.318        
cufflinks 1.621        
cufflinks 2.718        
cufflinks 0.14       Low
cufflinks 0.623        
cufflinks 1.395        
cufflinks 9.067     High High
cufflinks 1.288        
cufflinks 0.378        
cufflinks 11.875     High High
cufflinks 1.056        
cufflinks 13.081     High High

0 Strain