Gene : Glyma.17G058400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11638:SF123 - CLP AMINO TERMINAL DOMAIN-CONTAINING PROTEIN Genomic Order:  584
Name:  ? Glyma.17G058400 Secondary Identifier:  ? PAC:30481646
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G058400 0.5kb upstream 0.5kb upstream 4651   true Chr17: 4429106-4433756 Glycine max
Glyma.17G058400 0.5kb upstream 0.5kb upstream 500   false Chr17: 4433257-4433756 Glycine max
Glyma.17G058400 0.5kb downstream 0.5kb downstream 4651   true Chr17: 4428606-4433256 Glycine max
Glyma.17G058400 0.5kb downstream 0.5kb downstream 500   false Chr17: 4428606-4429105 Glycine max
Glyma.17G058400 1.0kb upstream 1.0kb upstream 5151   true Chr17: 4429106-4434256 Glycine max
Glyma.17G058400 1.0kb upstream 1.0kb upstream 1000   false Chr17: 4433257-4434256 Glycine max
Glyma.17G058400 1.0kb downstream 1.0kb downstream 5151   true Chr17: 4428106-4433256 Glycine max
Glyma.17G058400 1.0kb downstream 1.0kb downstream 1000   false Chr17: 4428106-4429105 Glycine max
Glyma.17G058400 2.0kb upstream 2.0kb upstream 6151   true Chr17: 4429106-4435256 Glycine max
Glyma.17G058400 2.0kb upstream 2.0kb upstream 2000   false Chr17: 4433257-4435256 Glycine max
Glyma.17G058400 2.0kb downstream 2.0kb downstream 6151   true Chr17: 4427106-4433256 Glycine max
Glyma.17G058400 2.0kb downstream 2.0kb downstream 2000   false Chr17: 4427106-4429105 Glycine max
Glyma.17G058400 5.0kb upstream 5.0kb upstream 9151   true Chr17: 4429106-4438256 Glycine max
Glyma.17G058400 5.0kb upstream 5.0kb upstream 5000   false Chr17: 4433257-4438256 Glycine max
Glyma.17G058400 5.0kb downstream 5.0kb downstream 9151   true Chr17: 4424106-4433256 Glycine max
Glyma.17G058400 5.0kb downstream 5.0kb downstream 5000   false Chr17: 4424106-4429105 Glycine max
Glyma.17G058400 10.0kb upstream 10.0kb upstream 14151   true Chr17: 4429106-4443256 Glycine max
Glyma.17G058400 10.0kb upstream 10.0kb upstream 10000   false Chr17: 4433257-4443256 Glycine max
Glyma.17G058400 10.0kb downstream 10.0kb downstream 14151   true Chr17: 4419106-4433256 Glycine max
Glyma.17G058400 10.0kb downstream 10.0kb downstream 10000   false Chr17: 4419106-4429105 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250538 5265 Fabidae View MSA
124066175 5270 Rosid View MSA
123751294 5271 Pentapetalae View MSA
122791347 5272 Eudicot View MSA
122049419 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.199023 0.0 0.739072 Low Low
cufflinks 3.33408 0.0 9.22916   High
cufflinks 0.219948 0.0 0.811042   Low
cufflinks 0.702497 0.0 2.36805    
cufflinks 1.32566 0.0 4.11445    
cufflinks 0.439781 0.0 1.55434    
cufflinks 1.61364 0.0 4.8692    
cufflinks 3.33373 0.0 9.20474   High
cufflinks 2.02791 0.0 5.91981    
cufflinks 1.535        
cufflinks 0.235       Low
cufflinks 0.707        
cufflinks 2.726        
cufflinks 1.453        
cufflinks 0.104       Low
cufflinks 3.242       High
cufflinks 0.265       Low
cufflinks 1.276        
cufflinks 4.236       High
cufflinks 2.598        
cufflinks 0.276       Low
cufflinks 2.743        
cufflinks 2.572        
cufflinks 0.435        
cufflinks 2.582        
cufflinks 0.434        

0 Strain