Gene : Glyma.17G047100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31384:SF21 - AUXIN RESPONSE FACTOR 19-RELATED Genomic Order:  471
Name:  ? Glyma.17G047100 Secondary Identifier:  ? PAC:30481976
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G047100 0.5kb upstream 0.5kb upstream 8519   true Chr17: 3560057-3568575 Glycine max
Glyma.17G047100 0.5kb upstream 0.5kb upstream 500   false Chr17: 3560057-3560556 Glycine max
Glyma.17G047100 0.5kb downstream 0.5kb downstream 8519   true Chr17: 3560557-3569075 Glycine max
Glyma.17G047100 0.5kb downstream 0.5kb downstream 500   false Chr17: 3568576-3569075 Glycine max
Glyma.17G047100 1.0kb upstream 1.0kb upstream 9019   true Chr17: 3559557-3568575 Glycine max
Glyma.17G047100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 3559557-3560556 Glycine max
Glyma.17G047100 1.0kb downstream 1.0kb downstream 9019   true Chr17: 3560557-3569575 Glycine max
Glyma.17G047100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 3568576-3569575 Glycine max
Glyma.17G047100 2.0kb upstream 2.0kb upstream 10019   true Chr17: 3558557-3568575 Glycine max
Glyma.17G047100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 3558557-3560556 Glycine max
Glyma.17G047100 2.0kb downstream 2.0kb downstream 10019   true Chr17: 3560557-3570575 Glycine max
Glyma.17G047100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 3568576-3570575 Glycine max
Glyma.17G047100 5.0kb upstream 5.0kb upstream 13019   true Chr17: 3555557-3568575 Glycine max
Glyma.17G047100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 3555557-3560556 Glycine max
Glyma.17G047100 5.0kb downstream 5.0kb downstream 13019   true Chr17: 3560557-3573575 Glycine max
Glyma.17G047100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 3568576-3573575 Glycine max
Glyma.17G047100 10.0kb upstream 10.0kb upstream 18019   true Chr17: 3550557-3568575 Glycine max
Glyma.17G047100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 3550557-3560556 Glycine max
Glyma.17G047100 10.0kb downstream 10.0kb downstream 18019   true Chr17: 3560557-3578575 Glycine max
Glyma.17G047100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 3568576-3578575 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314345 5265 Fabidae View MSA
124073682 5270 Rosid View MSA
123741284 5271 Pentapetalae View MSA
122791344 5272 Eudicot View MSA
122042731 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.80199 0.0 12.8352    
cufflinks 9.68677 0.0 26.2002    
cufflinks 5.90082 0.0 15.7437    
cufflinks 8.41109 0.0 22.6112    
cufflinks 6.21396 0.0 16.5816    
cufflinks 1.96289 0.0 5.55023   Low
cufflinks 10.9053 0.0 29.6976    
cufflinks 15.3443 0.0 43.1871   High
cufflinks 2.7286 0.0 7.48964   Low
cufflinks 5.159        
cufflinks 0.589       Low
cufflinks 5.451        
cufflinks 3.777        
cufflinks 4.717        
cufflinks 0.184       Low
cufflinks 6.13        
cufflinks 4.299        
cufflinks 4.786        
cufflinks 8.169     High  
cufflinks 5.541        
cufflinks 1.389        
cufflinks 5.485        
cufflinks 4.438        
cufflinks 0.883       Low
cufflinks 6.054        
cufflinks 2.793        

0 Strain