Gene : Glyma.17G048000 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG2969 - Uncharacterized conserved protein Genomic Order:  480
Name:  ? Glyma.17G048000 Secondary Identifier:  ? PAC:30480142
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G048000 0.5kb upstream 0.5kb upstream 3299   true Chr17: 3636384-3639682 Glycine max
Glyma.17G048000 0.5kb upstream 0.5kb upstream 500   false Chr17: 3636384-3636883 Glycine max
Glyma.17G048000 0.5kb downstream 0.5kb downstream 3299   true Chr17: 3636884-3640182 Glycine max
Glyma.17G048000 0.5kb downstream 0.5kb downstream 500   false Chr17: 3639683-3640182 Glycine max
Glyma.17G048000 1.0kb upstream 1.0kb upstream 3799   true Chr17: 3635884-3639682 Glycine max
Glyma.17G048000 1.0kb upstream 1.0kb upstream 1000   false Chr17: 3635884-3636883 Glycine max
Glyma.17G048000 1.0kb downstream 1.0kb downstream 3799   true Chr17: 3636884-3640682 Glycine max
Glyma.17G048000 1.0kb downstream 1.0kb downstream 1000   false Chr17: 3639683-3640682 Glycine max
Glyma.17G048000 2.0kb upstream 2.0kb upstream 4799   true Chr17: 3634884-3639682 Glycine max
Glyma.17G048000 2.0kb upstream 2.0kb upstream 2000   false Chr17: 3634884-3636883 Glycine max
Glyma.17G048000 2.0kb downstream 2.0kb downstream 4799   true Chr17: 3636884-3641682 Glycine max
Glyma.17G048000 2.0kb downstream 2.0kb downstream 2000   false Chr17: 3639683-3641682 Glycine max
Glyma.17G048000 5.0kb upstream 5.0kb upstream 7799   true Chr17: 3631884-3639682 Glycine max
Glyma.17G048000 5.0kb upstream 5.0kb upstream 5000   false Chr17: 3631884-3636883 Glycine max
Glyma.17G048000 5.0kb downstream 5.0kb downstream 7799   true Chr17: 3636884-3644682 Glycine max
Glyma.17G048000 5.0kb downstream 5.0kb downstream 5000   false Chr17: 3639683-3644682 Glycine max
Glyma.17G048000 10.0kb upstream 10.0kb upstream 12799   true Chr17: 3626884-3639682 Glycine max
Glyma.17G048000 10.0kb upstream 10.0kb upstream 10000   false Chr17: 3626884-3636883 Glycine max
Glyma.17G048000 10.0kb downstream 10.0kb downstream 12799   true Chr17: 3636884-3649682 Glycine max
Glyma.17G048000 10.0kb downstream 10.0kb downstream 10000   false Chr17: 3639683-3649682 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307212 5265 Fabidae View MSA
124062516 5270 Rosid View MSA
123738522 5271 Pentapetalae View MSA
122791534 5272 Eudicot View MSA
122049807 5273 Angiosperm View MSA
121346463 5274 Embryophyte View MSA
123424002 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.0187 0.0 107.737 High High
cufflinks 19.8854 0.0 53.2556    
cufflinks 17.7743 0.0 47.7756    
cufflinks 27.0588 0.0 72.1958 High  
cufflinks 19.5479 0.0 52.3512    
cufflinks 15.7215 0.0 42.4969   Low
cufflinks 56.3614 0.0 155.05 High High
cufflinks 21.9667 0.0 58.6769 High  
cufflinks 19.1101 0.0 51.2072    
cufflinks 4.971        
cufflinks 3.776        
cufflinks 7.933     High High
cufflinks 5.55        
cufflinks 5.717        
cufflinks 5.302     High  
cufflinks 4.406        
cufflinks 2.6       Low
cufflinks 9.462     High High
cufflinks 6.708       High
cufflinks 4.057        
cufflinks 3.112       Low
cufflinks 4.438        
cufflinks 4.56        
cufflinks 3.706        
cufflinks 4.793        
cufflinks 4.526        

0 Strain