Gene : Glyma.17G052300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10052//PTHR10052:SF11 - 60S RIBOSOMAL PROTEIN L18A Genomic Order:  523
Name:  ? Glyma.17G052300 Secondary Identifier:  ? PAC:30481932
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G052300 0.5kb upstream 0.5kb upstream 4547   true Chr17: 3966643-3971189 Glycine max
Glyma.17G052300 0.5kb upstream 0.5kb upstream 500   false Chr17: 3970690-3971189 Glycine max
Glyma.17G052300 0.5kb downstream 0.5kb downstream 4547   true Chr17: 3966143-3970689 Glycine max
Glyma.17G052300 0.5kb downstream 0.5kb downstream 500   false Chr17: 3966143-3966642 Glycine max
Glyma.17G052300 1.0kb upstream 1.0kb upstream 5047   true Chr17: 3966643-3971689 Glycine max
Glyma.17G052300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 3970690-3971689 Glycine max
Glyma.17G052300 1.0kb downstream 1.0kb downstream 5047   true Chr17: 3965643-3970689 Glycine max
Glyma.17G052300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 3965643-3966642 Glycine max
Glyma.17G052300 2.0kb upstream 2.0kb upstream 6047   true Chr17: 3966643-3972689 Glycine max
Glyma.17G052300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 3970690-3972689 Glycine max
Glyma.17G052300 2.0kb downstream 2.0kb downstream 6047   true Chr17: 3964643-3970689 Glycine max
Glyma.17G052300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 3964643-3966642 Glycine max
Glyma.17G052300 5.0kb upstream 5.0kb upstream 9047   true Chr17: 3966643-3975689 Glycine max
Glyma.17G052300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 3970690-3975689 Glycine max
Glyma.17G052300 5.0kb downstream 5.0kb downstream 9047   true Chr17: 3961643-3970689 Glycine max
Glyma.17G052300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 3961643-3966642 Glycine max
Glyma.17G052300 10.0kb upstream 10.0kb upstream 14047   true Chr17: 3966643-3980689 Glycine max
Glyma.17G052300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 3970690-3980689 Glycine max
Glyma.17G052300 10.0kb downstream 10.0kb downstream 14047   true Chr17: 3956643-3970689 Glycine max
Glyma.17G052300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 3956643-3966642 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027441 5273 Angiosperm View MSA
122311030 5265 Fabidae View MSA
124066289 5270 Rosid View MSA
123745455 5271 Pentapetalae View MSA
122796236 5272 Eudicot View MSA
121350597 5274 Embryophyte View MSA
123425775 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.32388 0.0 21.7455    
cufflinks 5.25574 0.0 16.3585   Low
cufflinks 10.2191 0.0 28.9566    
cufflinks 6.89168 0.0 20.5793    
cufflinks 7.28557 0.0 21.6492    
cufflinks 15.0009 0.0 41.1674   High
cufflinks 6.17156 0.0 18.7701    
cufflinks 8.66561 0.0 25.1478    
cufflinks 8.69026 0.0 25.2202    
cufflinks 2.117        
cufflinks 2.548        
cufflinks 2.514        
cufflinks 3.308       High
cufflinks 2.303        
cufflinks 1.702       Low
cufflinks 2.413        
cufflinks 1.977        
cufflinks 2.142        
cufflinks 1.693       Low
cufflinks 2.582        
cufflinks 2.709        
cufflinks 2.782        
cufflinks 1.81       Low
cufflinks 3.184       High
cufflinks 2.531        
cufflinks 2.074        

0 Strain