Gene : Glyma.17G039100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11964:SF16 - S-ADENOSYLMETHIONINE SYNTHASE 4 Genomic Order:  391
Name:  ? Glyma.17G039100 Secondary Identifier:  ? PAC:30482137
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ETHYL-PWY Glycine max pathologic  
Gmax PWY-5041 Glycine max pathologic  
Gmax PWY-7270 Glycine max pathologic  
Gmax PWY-7528 Glycine max pathologic  
Gmax SAM-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G039100 0.5kb upstream 0.5kb upstream 2744   true Chr17: 2894909-2897652 Glycine max
Glyma.17G039100 0.5kb upstream 0.5kb upstream 500   false Chr17: 2894909-2895408 Glycine max
Glyma.17G039100 0.5kb downstream 0.5kb downstream 2744   true Chr17: 2895409-2898152 Glycine max
Glyma.17G039100 0.5kb downstream 0.5kb downstream 500   false Chr17: 2897653-2898152 Glycine max
Glyma.17G039100 1.0kb upstream 1.0kb upstream 3244   true Chr17: 2894409-2897652 Glycine max
Glyma.17G039100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 2894409-2895408 Glycine max
Glyma.17G039100 1.0kb downstream 1.0kb downstream 3244   true Chr17: 2895409-2898652 Glycine max
Glyma.17G039100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 2897653-2898652 Glycine max
Glyma.17G039100 2.0kb upstream 2.0kb upstream 4244   true Chr17: 2893409-2897652 Glycine max
Glyma.17G039100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 2893409-2895408 Glycine max
Glyma.17G039100 2.0kb downstream 2.0kb downstream 4244   true Chr17: 2895409-2899652 Glycine max
Glyma.17G039100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 2897653-2899652 Glycine max
Glyma.17G039100 5.0kb upstream 5.0kb upstream 7244   true Chr17: 2890409-2897652 Glycine max
Glyma.17G039100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 2890409-2895408 Glycine max
Glyma.17G039100 5.0kb downstream 5.0kb downstream 7244   true Chr17: 2895409-2902652 Glycine max
Glyma.17G039100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 2897653-2902652 Glycine max
Glyma.17G039100 10.0kb upstream 10.0kb upstream 12244   true Chr17: 2885409-2897652 Glycine max
Glyma.17G039100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 2885409-2895408 Glycine max
Glyma.17G039100 10.0kb downstream 10.0kb downstream 12244   true Chr17: 2895409-2907652 Glycine max
Glyma.17G039100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 2897653-2907652 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312282 5265 Fabidae View MSA
124071804 5270 Rosid View MSA
123752865 5271 Pentapetalae View MSA
122794208 5272 Eudicot View MSA
122047125 5273 Angiosperm View MSA
121349455 5274 Embryophyte View MSA
123428115 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 449.239 0.0 2069.5 High  
cufflinks 564.511 0.0 2812.35 High  
cufflinks 412.907 0.0 1825.26 High  
cufflinks 1827.8 0.0 16090.6 High High
cufflinks 595.966 0.0 3083.55 High  
cufflinks 729.577 0.0 4083.64 High  
cufflinks 2825.06 2813.23 2836.89 High High
cufflinks 560.689 0.0 2825.13 High  
cufflinks 481.509 0.0 2281.07 High  
cufflinks 232.311     High  
cufflinks 72.516     High Low
cufflinks 201.585     High  
cufflinks 176.79     High  
cufflinks 134.091     High  
cufflinks 47.778     High Low
cufflinks 266.515     High  
cufflinks 135.974     High  
cufflinks 217.157     High  
cufflinks 406.776     High High
cufflinks 265.322     High  
cufflinks 69.882     High Low
cufflinks 266.481     High  
cufflinks 201.061     High  
cufflinks 136.937     High  
cufflinks 268.308     High  
cufflinks 89.108     High Low

0 Strain