Gene : Glyma.17G078300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11972//PTHR11972:SF76 - NADPH OXIDASE Genomic Order:  783
Name:  ? Glyma.17G078300 Secondary Identifier:  ? PAC:30481076
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G078300 0.5kb upstream 0.5kb upstream 7896   true Chr17: 6103499-6111394 Glycine max
Glyma.17G078300 0.5kb upstream 0.5kb upstream 500   false Chr17: 6110895-6111394 Glycine max
Glyma.17G078300 0.5kb downstream 0.5kb downstream 7896   true Chr17: 6102999-6110894 Glycine max
Glyma.17G078300 0.5kb downstream 0.5kb downstream 500   false Chr17: 6102999-6103498 Glycine max
Glyma.17G078300 1.0kb upstream 1.0kb upstream 8396   true Chr17: 6103499-6111894 Glycine max
Glyma.17G078300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 6110895-6111894 Glycine max
Glyma.17G078300 1.0kb downstream 1.0kb downstream 8396   true Chr17: 6102499-6110894 Glycine max
Glyma.17G078300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 6102499-6103498 Glycine max
Glyma.17G078300 2.0kb upstream 2.0kb upstream 9396   true Chr17: 6103499-6112894 Glycine max
Glyma.17G078300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 6110895-6112894 Glycine max
Glyma.17G078300 2.0kb downstream 2.0kb downstream 9396   true Chr17: 6101499-6110894 Glycine max
Glyma.17G078300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 6101499-6103498 Glycine max
Glyma.17G078300 5.0kb upstream 5.0kb upstream 12396   true Chr17: 6103499-6115894 Glycine max
Glyma.17G078300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 6110895-6115894 Glycine max
Glyma.17G078300 5.0kb downstream 5.0kb downstream 12396   true Chr17: 6098499-6110894 Glycine max
Glyma.17G078300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 6098499-6103498 Glycine max
Glyma.17G078300 10.0kb upstream 10.0kb upstream 17396   true Chr17: 6103499-6120894 Glycine max
Glyma.17G078300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 6110895-6120894 Glycine max
Glyma.17G078300 10.0kb downstream 10.0kb downstream 17396   true Chr17: 6093499-6110894 Glycine max
Glyma.17G078300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 6093499-6103498 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300900 5265 Fabidae View MSA
124037612 5270 Rosid View MSA
123743379 5271 Pentapetalae View MSA
122794303 5272 Eudicot View MSA
122049600 5273 Angiosperm View MSA
121311497 5274 Embryophyte View MSA
123427915 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.286877 0.0 1.74874    
cufflinks 0.14494 0.0 0.964853 Low Low
cufflinks 3.44696 0.0 11.1703    
cufflinks 8.12418 0.0 24.0916    
cufflinks 6.86672 0.0 20.694    
cufflinks 18.8666 0.0 59.9004   High
cufflinks 0.0909527 0.0 0.552575 Low Low
cufflinks 9.55265 0.0 28.3228    
cufflinks 8.96557 0.0 26.5931    
cufflinks 1.942        
cufflinks 0.437        
cufflinks 0.832        
cufflinks 9.023     High High
cufflinks 2.123        
cufflinks 0.49        
cufflinks 0.082     Low  
cufflinks 2.49       High
cufflinks 0.723        
cufflinks 0.097     Low  
cufflinks 0.024     Low Low
cufflinks 0.906        
cufflinks 0.011     Low Low
cufflinks 0.026     Low Low
cufflinks 0.479        
cufflinks 0.034     Low Low
cufflinks 1.704        

0 Strain