Gene : Glyma.17G078500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10202:SF13 - PRESENILIN-2 Genomic Order:  785
Name:  ? Glyma.17G078500 Secondary Identifier:  ? PAC:30480655
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G078500 0.5kb upstream 0.5kb upstream 3359   true Chr17: 6120898-6124256 Glycine max
Glyma.17G078500 0.5kb upstream 0.5kb upstream 500   false Chr17: 6120898-6121397 Glycine max
Glyma.17G078500 0.5kb downstream 0.5kb downstream 3359   true Chr17: 6121398-6124756 Glycine max
Glyma.17G078500 0.5kb downstream 0.5kb downstream 500   false Chr17: 6124257-6124756 Glycine max
Glyma.17G078500 1.0kb upstream 1.0kb upstream 3859   true Chr17: 6120398-6124256 Glycine max
Glyma.17G078500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 6120398-6121397 Glycine max
Glyma.17G078500 1.0kb downstream 1.0kb downstream 3859   true Chr17: 6121398-6125256 Glycine max
Glyma.17G078500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 6124257-6125256 Glycine max
Glyma.17G078500 2.0kb upstream 2.0kb upstream 4859   true Chr17: 6119398-6124256 Glycine max
Glyma.17G078500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 6119398-6121397 Glycine max
Glyma.17G078500 2.0kb downstream 2.0kb downstream 4859   true Chr17: 6121398-6126256 Glycine max
Glyma.17G078500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 6124257-6126256 Glycine max
Glyma.17G078500 5.0kb upstream 5.0kb upstream 7859   true Chr17: 6116398-6124256 Glycine max
Glyma.17G078500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 6116398-6121397 Glycine max
Glyma.17G078500 5.0kb downstream 5.0kb downstream 7859   true Chr17: 6121398-6129256 Glycine max
Glyma.17G078500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 6124257-6129256 Glycine max
Glyma.17G078500 10.0kb upstream 10.0kb upstream 12859   true Chr17: 6111398-6124256 Glycine max
Glyma.17G078500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 6111398-6121397 Glycine max
Glyma.17G078500 10.0kb downstream 10.0kb downstream 12859   true Chr17: 6121398-6134256 Glycine max
Glyma.17G078500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 6124257-6134256 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299279 5265 Fabidae View MSA
124063592 5270 Rosid View MSA
123748546 5271 Pentapetalae View MSA
122790840 5272 Eudicot View MSA
122049657 5273 Angiosperm View MSA
121347498 5274 Embryophyte View MSA
123424512 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.71279 0.0 11.2644    
cufflinks 4.07213 0.0 12.1976    
cufflinks 3.27337 0.0 10.1031   Low
cufflinks 4.12681 0.0 12.3294    
cufflinks 4.34755 0.0 12.8813    
cufflinks 3.72048 0.0 11.2536    
cufflinks 6.99881 0.0 19.5981   High
cufflinks 4.4849 0.0 13.2656    
cufflinks 4.3112 0.0 12.795    
cufflinks 1.511        
cufflinks 1.063       Low
cufflinks 2.284        
cufflinks 2.013        
cufflinks 2.667       High
cufflinks 1.765        
cufflinks 1.791        
cufflinks 0.863       Low
cufflinks 2.787       High
cufflinks 2.797       High
cufflinks 1.642        
cufflinks 2.486       High
cufflinks 1.605        
cufflinks 1.443        
cufflinks 1.255        
cufflinks 1.728        
cufflinks 1.529        

0 Strain