Gene : Glyma.17G082700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33209:SF1 - SERINE PROTEASE SPPA, CHLOROPLASTIC Genomic Order:  827
Name:  ? Glyma.17G082700 Secondary Identifier:  ? PAC:30479445
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G082700 0.5kb upstream 0.5kb upstream 8270   true Chr17: 6425202-6433471 Glycine max
Glyma.17G082700 0.5kb upstream 0.5kb upstream 500   false Chr17: 6432972-6433471 Glycine max
Glyma.17G082700 0.5kb downstream 0.5kb downstream 8270   true Chr17: 6424702-6432971 Glycine max
Glyma.17G082700 0.5kb downstream 0.5kb downstream 500   false Chr17: 6424702-6425201 Glycine max
Glyma.17G082700 1.0kb upstream 1.0kb upstream 8770   true Chr17: 6425202-6433971 Glycine max
Glyma.17G082700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 6432972-6433971 Glycine max
Glyma.17G082700 1.0kb downstream 1.0kb downstream 8770   true Chr17: 6424202-6432971 Glycine max
Glyma.17G082700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 6424202-6425201 Glycine max
Glyma.17G082700 2.0kb upstream 2.0kb upstream 9770   true Chr17: 6425202-6434971 Glycine max
Glyma.17G082700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 6432972-6434971 Glycine max
Glyma.17G082700 2.0kb downstream 2.0kb downstream 9770   true Chr17: 6423202-6432971 Glycine max
Glyma.17G082700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 6423202-6425201 Glycine max
Glyma.17G082700 5.0kb upstream 5.0kb upstream 12770   true Chr17: 6425202-6437971 Glycine max
Glyma.17G082700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 6432972-6437971 Glycine max
Glyma.17G082700 5.0kb downstream 5.0kb downstream 12770   true Chr17: 6420202-6432971 Glycine max
Glyma.17G082700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 6420202-6425201 Glycine max
Glyma.17G082700 10.0kb upstream 10.0kb upstream 17770   true Chr17: 6425202-6442971 Glycine max
Glyma.17G082700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 6432972-6442971 Glycine max
Glyma.17G082700 10.0kb downstream 10.0kb downstream 17770   true Chr17: 6415202-6432971 Glycine max
Glyma.17G082700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 6415202-6425201 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297022 5265 Fabidae View MSA
124067655 5270 Rosid View MSA
123738820 5271 Pentapetalae View MSA
122785684 5272 Eudicot View MSA
122045424 5273 Angiosperm View MSA
121344928 5274 Embryophyte View MSA
123424112 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.13614 0.0 19.6881    
cufflinks 4.20168 0.0 17.0338   Low
cufflinks 11.9578 0.0 40.8717   High
cufflinks 9.92729 0.0 34.4729   High
cufflinks 4.78008 0.0 18.7773    
cufflinks 6.25754 0.0 19.9473    
cufflinks 5.92913 0.0 22.381    
cufflinks 6.27274 0.0 23.0353    
cufflinks 4.84458 0.0 16.2533    
cufflinks 0.632        
cufflinks 1.151       High
cufflinks 1.544       High
cufflinks 0.55        
cufflinks 0.365       Low
cufflinks 1.129       High
cufflinks 0.492        
cufflinks 0.759        
cufflinks 0.978        
cufflinks 0.657        
cufflinks 0.419       Low
cufflinks 0.987        
cufflinks 0.459        
cufflinks 0.374       Low
cufflinks 0.915        
cufflinks 0.49        
cufflinks 0.96        

0 Strain