Gene : Glyma.17G073500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10217:SF500 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 5-RELATED Genomic Order:  735
Name:  ? Glyma.17G073500 Secondary Identifier:  ? PAC:30479285
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G073500 0.5kb upstream 0.5kb upstream 8444   true Chr17: 5743433-5751876 Glycine max
Glyma.17G073500 0.5kb upstream 0.5kb upstream 500   false Chr17: 5743433-5743932 Glycine max
Glyma.17G073500 0.5kb downstream 0.5kb downstream 8444   true Chr17: 5743933-5752376 Glycine max
Glyma.17G073500 0.5kb downstream 0.5kb downstream 500   false Chr17: 5751877-5752376 Glycine max
Glyma.17G073500 1.0kb upstream 1.0kb upstream 8944   true Chr17: 5742933-5751876 Glycine max
Glyma.17G073500 1.0kb upstream 1.0kb upstream 1000   false Chr17: 5742933-5743932 Glycine max
Glyma.17G073500 1.0kb downstream 1.0kb downstream 8944   true Chr17: 5743933-5752876 Glycine max
Glyma.17G073500 1.0kb downstream 1.0kb downstream 1000   false Chr17: 5751877-5752876 Glycine max
Glyma.17G073500 2.0kb upstream 2.0kb upstream 9944   true Chr17: 5741933-5751876 Glycine max
Glyma.17G073500 2.0kb upstream 2.0kb upstream 2000   false Chr17: 5741933-5743932 Glycine max
Glyma.17G073500 2.0kb downstream 2.0kb downstream 9944   true Chr17: 5743933-5753876 Glycine max
Glyma.17G073500 2.0kb downstream 2.0kb downstream 2000   false Chr17: 5751877-5753876 Glycine max
Glyma.17G073500 5.0kb upstream 5.0kb upstream 12944   true Chr17: 5738933-5751876 Glycine max
Glyma.17G073500 5.0kb upstream 5.0kb upstream 5000   false Chr17: 5738933-5743932 Glycine max
Glyma.17G073500 5.0kb downstream 5.0kb downstream 12944   true Chr17: 5743933-5756876 Glycine max
Glyma.17G073500 5.0kb downstream 5.0kb downstream 5000   false Chr17: 5751877-5756876 Glycine max
Glyma.17G073500 10.0kb upstream 10.0kb upstream 17944   true Chr17: 5733933-5751876 Glycine max
Glyma.17G073500 10.0kb upstream 10.0kb upstream 10000   false Chr17: 5733933-5743932 Glycine max
Glyma.17G073500 10.0kb downstream 10.0kb downstream 17944   true Chr17: 5743933-5761876 Glycine max
Glyma.17G073500 10.0kb downstream 10.0kb downstream 10000   false Chr17: 5751877-5761876 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309869 5265 Fabidae View MSA
124064062 5270 Rosid View MSA
123748998 5271 Pentapetalae View MSA
122786679 5272 Eudicot View MSA
122043565 5273 Angiosperm View MSA
121351754 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.1805 0.0 110.914 High High
cufflinks 10.2244 0.0 35.1304   Low
cufflinks 23.7547 0.0 89.5194 High  
cufflinks 16.8139 0.0 60.7474    
cufflinks 13.2491 0.0 46.5342    
cufflinks 23.9289 0.0 87.3856 High  
cufflinks 15.0945 0.0 53.8063    
cufflinks 17.7656 0.0 62.6693    
cufflinks 14.1643 0.0 49.4954    
cufflinks 2.21        
cufflinks 3.59       High
cufflinks 2.499        
cufflinks 2.048        
cufflinks 1.197       Low
cufflinks 3.611       High
cufflinks 2.797        
cufflinks 2.964        
cufflinks 2.237        
cufflinks 1.815       Low
cufflinks 2.864        
cufflinks 2.924        
cufflinks 2.807        
cufflinks 2.024        
cufflinks 3.977       High
cufflinks 2.68        
cufflinks 3.068        

0 Strain