Gene : Glyma.17G074700 G. max Wm82.a2.v1
Defline:  (1 of 2) PF03031//PF12738 - NLI interacting factor-like phosphatase (NIF) // twin BRCT domain (PTCB-BRCT) Genomic Order:  747
Name:  ? Glyma.17G074700 Secondary Identifier:  ? PAC:30481587
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G074700 0.5kb upstream 0.5kb upstream 5430   true Chr17: 5855296-5860725 Glycine max
Glyma.17G074700 0.5kb upstream 0.5kb upstream 500   false Chr17: 5855296-5855795 Glycine max
Glyma.17G074700 0.5kb downstream 0.5kb downstream 5430   true Chr17: 5855796-5861225 Glycine max
Glyma.17G074700 0.5kb downstream 0.5kb downstream 500   false Chr17: 5860726-5861225 Glycine max
Glyma.17G074700 1.0kb upstream 1.0kb upstream 5930   true Chr17: 5854796-5860725 Glycine max
Glyma.17G074700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 5854796-5855795 Glycine max
Glyma.17G074700 1.0kb downstream 1.0kb downstream 5930   true Chr17: 5855796-5861725 Glycine max
Glyma.17G074700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 5860726-5861725 Glycine max
Glyma.17G074700 2.0kb upstream 2.0kb upstream 6930   true Chr17: 5853796-5860725 Glycine max
Glyma.17G074700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 5853796-5855795 Glycine max
Glyma.17G074700 2.0kb downstream 2.0kb downstream 6930   true Chr17: 5855796-5862725 Glycine max
Glyma.17G074700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 5860726-5862725 Glycine max
Glyma.17G074700 5.0kb upstream 5.0kb upstream 9930   true Chr17: 5850796-5860725 Glycine max
Glyma.17G074700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 5850796-5855795 Glycine max
Glyma.17G074700 5.0kb downstream 5.0kb downstream 9930   true Chr17: 5855796-5865725 Glycine max
Glyma.17G074700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 5860726-5865725 Glycine max
Glyma.17G074700 10.0kb upstream 10.0kb upstream 14930   true Chr17: 5845796-5860725 Glycine max
Glyma.17G074700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 5845796-5855795 Glycine max
Glyma.17G074700 10.0kb downstream 10.0kb downstream 14930   true Chr17: 5855796-5870725 Glycine max
Glyma.17G074700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 5860726-5870725 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304684 5265 Fabidae View MSA
124074677 5270 Rosid View MSA
123750170 5271 Pentapetalae View MSA
122796658 5272 Eudicot View MSA
122050770 5273 Angiosperm View MSA
123428917 5275 Viridiplantae View MSA
121350466 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.03739 0.0 12.7495    
cufflinks 5.72704 0.0 22.9868   High
cufflinks 2.9518 0.0 12.412    
cufflinks 4.98917 0.0 21.5768    
cufflinks 2.94855 0.0 12.5724    
cufflinks 2.58199 0.0 11.5962   Low
cufflinks 6.16245 0.0 24.9398   High
cufflinks 3.23164 0.0 13.2839    
cufflinks 4.45434 0.0 16.772    
cufflinks 0.344        
cufflinks 0.243       Low
cufflinks 0.809        
cufflinks 0.652        
cufflinks 0.776        
cufflinks 0.418        
cufflinks 0.675        
cufflinks 0.251       Low
cufflinks 0.901       High
cufflinks 0.945       High
cufflinks 0.591        
cufflinks 0.267       Low
cufflinks 0.633        
cufflinks 0.694        
cufflinks 0.293       Low
cufflinks 0.625        
cufflinks 0.263       Low

0 Strain