Gene : Glyma.17G106300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31065:SF11 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  1063
Name:  ? Glyma.17G106300 Secondary Identifier:  ? PAC:30480640
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G106300 0.5kb upstream 0.5kb upstream 2687   true Chr17: 8346411-8349097 Glycine max
Glyma.17G106300 0.5kb upstream 0.5kb upstream 500   false Chr17: 8346411-8346910 Glycine max
Glyma.17G106300 0.5kb downstream 0.5kb downstream 2687   true Chr17: 8346911-8349597 Glycine max
Glyma.17G106300 0.5kb downstream 0.5kb downstream 500   false Chr17: 8349098-8349597 Glycine max
Glyma.17G106300 1.0kb upstream 1.0kb upstream 3187   true Chr17: 8345911-8349097 Glycine max
Glyma.17G106300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 8345911-8346910 Glycine max
Glyma.17G106300 1.0kb downstream 1.0kb downstream 3187   true Chr17: 8346911-8350097 Glycine max
Glyma.17G106300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 8349098-8350097 Glycine max
Glyma.17G106300 2.0kb upstream 2.0kb upstream 4187   true Chr17: 8344911-8349097 Glycine max
Glyma.17G106300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 8344911-8346910 Glycine max
Glyma.17G106300 2.0kb downstream 2.0kb downstream 4187   true Chr17: 8346911-8351097 Glycine max
Glyma.17G106300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 8349098-8351097 Glycine max
Glyma.17G106300 5.0kb upstream 5.0kb upstream 7187   true Chr17: 8341911-8349097 Glycine max
Glyma.17G106300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 8341911-8346910 Glycine max
Glyma.17G106300 5.0kb downstream 5.0kb downstream 7187   true Chr17: 8346911-8354097 Glycine max
Glyma.17G106300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 8349098-8354097 Glycine max
Glyma.17G106300 10.0kb upstream 10.0kb upstream 12187   true Chr17: 8336911-8349097 Glycine max
Glyma.17G106300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 8336911-8346910 Glycine max
Glyma.17G106300 10.0kb downstream 10.0kb downstream 12187   true Chr17: 8346911-8359097 Glycine max
Glyma.17G106300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 8349098-8359097 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312691 5265 Fabidae View MSA
124068522 5270 Rosid View MSA
123747069 5271 Pentapetalae View MSA
122791391 5272 Eudicot View MSA
122044768 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0183181 0.0 0.0830729 Low Low
cufflinks 0.0807123 0.0 0.327205 Low  
cufflinks 0.333663 0.0 1.28024    
cufflinks 9.18797 0.0 26.0968   High
cufflinks 6.74824 0.0 19.8879    
cufflinks 0.369318 0.0 1.41271    
cufflinks 2.24153 0.0 7.64438    
cufflinks 9.03411 0.0 25.6556   High
cufflinks 0.28        
cufflinks 0.386        
cufflinks 0.036     Low  
cufflinks 8.719     High High
cufflinks 15.518     High High
cufflinks 3.512       High
cufflinks 0.018     Low Low
cufflinks 1.345        
cufflinks 0.208        
cufflinks 0.007     Low Low
cufflinks 0.017     Low Low
cufflinks 0.536        
cufflinks 0.028     Low  
cufflinks 0.04     Low  
cufflinks 0.301        
cufflinks 0.017     Low Low
cufflinks 1.03        

0 Strain