Gene : Glyma.17G107100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12948 - NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN Genomic Order:  1071
Name:  ? Glyma.17G107100 Secondary Identifier:  ? PAC:30479193
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G107100 0.5kb upstream 0.5kb upstream 6817   true Chr17: 8409540-8416356 Glycine max
Glyma.17G107100 0.5kb upstream 0.5kb upstream 500   false Chr17: 8409540-8410039 Glycine max
Glyma.17G107100 0.5kb downstream 0.5kb downstream 6817   true Chr17: 8410040-8416856 Glycine max
Glyma.17G107100 0.5kb downstream 0.5kb downstream 500   false Chr17: 8416357-8416856 Glycine max
Glyma.17G107100 1.0kb upstream 1.0kb upstream 7317   true Chr17: 8409040-8416356 Glycine max
Glyma.17G107100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 8409040-8410039 Glycine max
Glyma.17G107100 1.0kb downstream 1.0kb downstream 7317   true Chr17: 8410040-8417356 Glycine max
Glyma.17G107100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 8416357-8417356 Glycine max
Glyma.17G107100 2.0kb upstream 2.0kb upstream 8317   true Chr17: 8408040-8416356 Glycine max
Glyma.17G107100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 8408040-8410039 Glycine max
Glyma.17G107100 2.0kb downstream 2.0kb downstream 8317   true Chr17: 8410040-8418356 Glycine max
Glyma.17G107100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 8416357-8418356 Glycine max
Glyma.17G107100 5.0kb upstream 5.0kb upstream 11317   true Chr17: 8405040-8416356 Glycine max
Glyma.17G107100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 8405040-8410039 Glycine max
Glyma.17G107100 5.0kb downstream 5.0kb downstream 11317   true Chr17: 8410040-8421356 Glycine max
Glyma.17G107100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 8416357-8421356 Glycine max
Glyma.17G107100 10.0kb upstream 10.0kb upstream 16317   true Chr17: 8400040-8416356 Glycine max
Glyma.17G107100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 8400040-8410039 Glycine max
Glyma.17G107100 10.0kb downstream 10.0kb downstream 16317   true Chr17: 8410040-8426356 Glycine max
Glyma.17G107100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 8416357-8426356 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303079 5265 Fabidae View MSA
124064504 5270 Rosid View MSA
123740631 5271 Pentapetalae View MSA
122788504 5272 Eudicot View MSA
122046197 5273 Angiosperm View MSA
123429148 5275 Viridiplantae View MSA
121344011 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0182262 0.0 0.0779833 Low Low
cufflinks 0.360149 0.0 1.33741    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.346664 0.0 1.29243    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain