Gene : Glyma.17G108200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR14363:SF16 - HEPARANASE-LIKE PROTEIN 3 Genomic Order:  1082
Name:  ? Glyma.17G108200 Secondary Identifier:  ? PAC:30481860
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7213 Glycine max pathologic  
Gmax PWY-7214 Glycine max pathologic  
Gmax PWY-7445 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G108200 0.5kb upstream 0.5kb upstream 4104   true Chr17: 8480948-8485051 Glycine max
Glyma.17G108200 0.5kb upstream 0.5kb upstream 500   false Chr17: 8480948-8481447 Glycine max
Glyma.17G108200 0.5kb downstream 0.5kb downstream 4104   true Chr17: 8481448-8485551 Glycine max
Glyma.17G108200 0.5kb downstream 0.5kb downstream 500   false Chr17: 8485052-8485551 Glycine max
Glyma.17G108200 1.0kb upstream 1.0kb upstream 4604   true Chr17: 8480448-8485051 Glycine max
Glyma.17G108200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 8480448-8481447 Glycine max
Glyma.17G108200 1.0kb downstream 1.0kb downstream 4604   true Chr17: 8481448-8486051 Glycine max
Glyma.17G108200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 8485052-8486051 Glycine max
Glyma.17G108200 2.0kb upstream 2.0kb upstream 5604   true Chr17: 8479448-8485051 Glycine max
Glyma.17G108200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 8479448-8481447 Glycine max
Glyma.17G108200 2.0kb downstream 2.0kb downstream 5604   true Chr17: 8481448-8487051 Glycine max
Glyma.17G108200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 8485052-8487051 Glycine max
Glyma.17G108200 5.0kb upstream 5.0kb upstream 8604   true Chr17: 8476448-8485051 Glycine max
Glyma.17G108200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 8476448-8481447 Glycine max
Glyma.17G108200 5.0kb downstream 5.0kb downstream 8604   true Chr17: 8481448-8490051 Glycine max
Glyma.17G108200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 8485052-8490051 Glycine max
Glyma.17G108200 10.0kb upstream 10.0kb upstream 13604   true Chr17: 8471448-8485051 Glycine max
Glyma.17G108200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 8471448-8481447 Glycine max
Glyma.17G108200 10.0kb downstream 10.0kb downstream 13604   true Chr17: 8481448-8495051 Glycine max
Glyma.17G108200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 8485052-8495051 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310880 5265 Fabidae View MSA
124063624 5270 Rosid View MSA
123745490 5271 Pentapetalae View MSA
122791250 5272 Eudicot View MSA
122042729 5273 Angiosperm View MSA
121348264 5274 Embryophyte View MSA
123380798 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.77745 0.0 13.6504    
cufflinks 1.61222 0.0 5.32959   Low
cufflinks 3.75788 0.0 10.9906    
cufflinks 4.55417 0.0 13.0314    
cufflinks 4.09418 0.0 11.9349    
cufflinks 3.2534 0.0 9.74887    
cufflinks 2.44196 0.0 7.6456    
cufflinks 10.0189 0.0 26.9496   High
cufflinks 6.44656 0.0 17.8427    
cufflinks 3.611        
cufflinks 4.237        
cufflinks 1.578       Low
cufflinks 7.188        
cufflinks 4.247        
cufflinks 0.871       Low
cufflinks 13.81     High High
cufflinks 5.865        
cufflinks 1.84       Low
cufflinks 1.911       Low
cufflinks 17.786     High High
cufflinks 4.558        
cufflinks 15.088     High High
cufflinks 4.264        
cufflinks 2.71        
cufflinks 16.051     High High
cufflinks 7.637     High  

0 Strain