Gene : Glyma.17G109200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10903:SF68 - TRANSLOCASE OF CHLOROPLAST 90, CHLOROPLASTIC Genomic Order:  1092
Name:  ? Glyma.17G109200 Secondary Identifier:  ? PAC:30481517
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G109200 0.5kb upstream 0.5kb upstream 5338   true Chr17: 8552996-8558333 Glycine max
Glyma.17G109200 0.5kb upstream 0.5kb upstream 500   false Chr17: 8552996-8553495 Glycine max
Glyma.17G109200 0.5kb downstream 0.5kb downstream 5338   true Chr17: 8553496-8558833 Glycine max
Glyma.17G109200 0.5kb downstream 0.5kb downstream 500   false Chr17: 8558334-8558833 Glycine max
Glyma.17G109200 1.0kb upstream 1.0kb upstream 5838   true Chr17: 8552496-8558333 Glycine max
Glyma.17G109200 1.0kb upstream 1.0kb upstream 1000   false Chr17: 8552496-8553495 Glycine max
Glyma.17G109200 1.0kb downstream 1.0kb downstream 5838   true Chr17: 8553496-8559333 Glycine max
Glyma.17G109200 1.0kb downstream 1.0kb downstream 1000   false Chr17: 8558334-8559333 Glycine max
Glyma.17G109200 2.0kb upstream 2.0kb upstream 6838   true Chr17: 8551496-8558333 Glycine max
Glyma.17G109200 2.0kb upstream 2.0kb upstream 2000   false Chr17: 8551496-8553495 Glycine max
Glyma.17G109200 2.0kb downstream 2.0kb downstream 6838   true Chr17: 8553496-8560333 Glycine max
Glyma.17G109200 2.0kb downstream 2.0kb downstream 2000   false Chr17: 8558334-8560333 Glycine max
Glyma.17G109200 5.0kb upstream 5.0kb upstream 9838   true Chr17: 8548496-8558333 Glycine max
Glyma.17G109200 5.0kb upstream 5.0kb upstream 5000   false Chr17: 8548496-8553495 Glycine max
Glyma.17G109200 5.0kb downstream 5.0kb downstream 9838   true Chr17: 8553496-8563333 Glycine max
Glyma.17G109200 5.0kb downstream 5.0kb downstream 5000   false Chr17: 8558334-8563333 Glycine max
Glyma.17G109200 10.0kb upstream 10.0kb upstream 14838   true Chr17: 8543496-8558333 Glycine max
Glyma.17G109200 10.0kb upstream 10.0kb upstream 10000   false Chr17: 8543496-8553495 Glycine max
Glyma.17G109200 10.0kb downstream 10.0kb downstream 14838   true Chr17: 8553496-8568333 Glycine max
Glyma.17G109200 10.0kb downstream 10.0kb downstream 10000   false Chr17: 8558334-8568333 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314878 5265 Fabidae View MSA
124069161 5270 Rosid View MSA
123748605 5271 Pentapetalae View MSA
122793067 5272 Eudicot View MSA
122047543 5273 Angiosperm View MSA
121310755 5274 Embryophyte View MSA
123425638 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.4382 0.0 46.1943   High
cufflinks 7.01446 0.0 24.7079    
cufflinks 16.8037 0.0 59.9317   High
cufflinks 5.06528 0.0 18.9225    
cufflinks 4.63326 0.0 17.6254    
cufflinks 9.10397 0.0 27.9135    
cufflinks 6.4717 0.0 23.2256    
cufflinks 4.41109 0.0 16.5947   Low
cufflinks 5.71157 0.0 20.5184    
cufflinks 1.354       Low
cufflinks 3.502        
cufflinks 3.479        
cufflinks 1.489       Low
cufflinks 1.215       Low
cufflinks 2.764        
cufflinks 3.4        
cufflinks 1.63       Low
cufflinks 2.266        
cufflinks 2.17        
cufflinks 4.409       High
cufflinks 4.445       High
cufflinks 3.981        
cufflinks 3.571        
cufflinks 3.604        
cufflinks 3.929        
cufflinks 3.251        

0 Strain