Gene : Glyma.17G099300 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12963//PTHR12963:SF1 - THYROID RECEPTOR INTERACTING PROTEIN RELATED Genomic Order:  993
Name:  ? Glyma.17G099300 Secondary Identifier:  ? PAC:30478571
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G099300 0.5kb upstream 0.5kb upstream 3098   true Chr17: 7838198-7841295 Glycine max
Glyma.17G099300 0.5kb upstream 0.5kb upstream 500   false Chr17: 7840796-7841295 Glycine max
Glyma.17G099300 0.5kb downstream 0.5kb downstream 3098   true Chr17: 7837698-7840795 Glycine max
Glyma.17G099300 0.5kb downstream 0.5kb downstream 500   false Chr17: 7837698-7838197 Glycine max
Glyma.17G099300 1.0kb upstream 1.0kb upstream 3598   true Chr17: 7838198-7841795 Glycine max
Glyma.17G099300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 7840796-7841795 Glycine max
Glyma.17G099300 1.0kb downstream 1.0kb downstream 3598   true Chr17: 7837198-7840795 Glycine max
Glyma.17G099300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 7837198-7838197 Glycine max
Glyma.17G099300 2.0kb upstream 2.0kb upstream 4598   true Chr17: 7838198-7842795 Glycine max
Glyma.17G099300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 7840796-7842795 Glycine max
Glyma.17G099300 2.0kb downstream 2.0kb downstream 4598   true Chr17: 7836198-7840795 Glycine max
Glyma.17G099300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 7836198-7838197 Glycine max
Glyma.17G099300 5.0kb upstream 5.0kb upstream 7598   true Chr17: 7838198-7845795 Glycine max
Glyma.17G099300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 7840796-7845795 Glycine max
Glyma.17G099300 5.0kb downstream 5.0kb downstream 7598   true Chr17: 7833198-7840795 Glycine max
Glyma.17G099300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 7833198-7838197 Glycine max
Glyma.17G099300 10.0kb upstream 10.0kb upstream 12598   true Chr17: 7838198-7850795 Glycine max
Glyma.17G099300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 7840796-7850795 Glycine max
Glyma.17G099300 10.0kb downstream 10.0kb downstream 12598   true Chr17: 7828198-7840795 Glycine max
Glyma.17G099300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 7828198-7838197 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308860 5265 Fabidae View MSA
124061012 5270 Rosid View MSA
123738411 5271 Pentapetalae View MSA
122786940 5272 Eudicot View MSA
122044191 5273 Angiosperm View MSA
121310249 5274 Embryophyte View MSA
123424634 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.27103 0.0 22.6447    
cufflinks 7.33726 0.0 20.2784    
cufflinks 7.86862 0.0 21.5922    
cufflinks 7.57435 0.0 20.8534    
cufflinks 6.84119 0.0 19.0015   Low
cufflinks 8.03136 0.0 22.0219    
cufflinks 7.63896 0.0 21.0567    
cufflinks 10.5407 0.0 28.4125   High
cufflinks 6.73586 0.0 18.7395   Low
cufflinks 6.626        
cufflinks 8.252     High  
cufflinks 6.38        
cufflinks 5.422       Low
cufflinks 5.961       Low
cufflinks 8.565     High  
cufflinks 7.716     High  
cufflinks 5.744       Low
cufflinks 5.951       Low
cufflinks 7.015        
cufflinks 9.599     High High
cufflinks 8.393     High  
cufflinks 8.71     High  
cufflinks 7.55     High  
cufflinks 8.728     High  
cufflinks 8.606     High  
cufflinks 7.733     High  

0 Strain