Gene : Glyma.17G100700 G. max Wm82.a2.v1
Defline:  (1 of 3) 1.3.1.83 - Geranylgeranyl diphosphate reductase / Geranylgeranyl reductase Genomic Order:  1007
Name:  ? Glyma.17G100700 Secondary Identifier:  ? PAC:30479255
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5063 Glycine max pathologic  
Gmax PWY-5064 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G100700 0.5kb upstream 0.5kb upstream 3647   true Chr17: 7921514-7925160 Glycine max
Glyma.17G100700 0.5kb upstream 0.5kb upstream 500   false Chr17: 7924661-7925160 Glycine max
Glyma.17G100700 0.5kb downstream 0.5kb downstream 3647   true Chr17: 7921014-7924660 Glycine max
Glyma.17G100700 0.5kb downstream 0.5kb downstream 500   false Chr17: 7921014-7921513 Glycine max
Glyma.17G100700 1.0kb upstream 1.0kb upstream 4147   true Chr17: 7921514-7925660 Glycine max
Glyma.17G100700 1.0kb upstream 1.0kb upstream 1000   false Chr17: 7924661-7925660 Glycine max
Glyma.17G100700 1.0kb downstream 1.0kb downstream 4147   true Chr17: 7920514-7924660 Glycine max
Glyma.17G100700 1.0kb downstream 1.0kb downstream 1000   false Chr17: 7920514-7921513 Glycine max
Glyma.17G100700 2.0kb upstream 2.0kb upstream 5147   true Chr17: 7921514-7926660 Glycine max
Glyma.17G100700 2.0kb upstream 2.0kb upstream 2000   false Chr17: 7924661-7926660 Glycine max
Glyma.17G100700 2.0kb downstream 2.0kb downstream 5147   true Chr17: 7919514-7924660 Glycine max
Glyma.17G100700 2.0kb downstream 2.0kb downstream 2000   false Chr17: 7919514-7921513 Glycine max
Glyma.17G100700 5.0kb upstream 5.0kb upstream 8147   true Chr17: 7921514-7929660 Glycine max
Glyma.17G100700 5.0kb upstream 5.0kb upstream 5000   false Chr17: 7924661-7929660 Glycine max
Glyma.17G100700 5.0kb downstream 5.0kb downstream 8147   true Chr17: 7916514-7924660 Glycine max
Glyma.17G100700 5.0kb downstream 5.0kb downstream 5000   false Chr17: 7916514-7921513 Glycine max
Glyma.17G100700 10.0kb upstream 10.0kb upstream 13147   true Chr17: 7921514-7934660 Glycine max
Glyma.17G100700 10.0kb upstream 10.0kb upstream 10000   false Chr17: 7924661-7934660 Glycine max
Glyma.17G100700 10.0kb downstream 10.0kb downstream 13147   true Chr17: 7911514-7924660 Glycine max
Glyma.17G100700 10.0kb downstream 10.0kb downstream 10000   false Chr17: 7911514-7921513 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305502 5265 Fabidae View MSA
124070478 5270 Rosid View MSA
123742493 5271 Pentapetalae View MSA
122794040 5272 Eudicot View MSA
122041542 5273 Angiosperm View MSA
121345615 5274 Embryophyte View MSA
123424772 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.8594 0.0 115.446 High  
cufflinks 50.1769 0.0 144.487 High High
cufflinks 19.3934 0.0 51.8562    
cufflinks 30.9048 0.0 84.7081 High  
cufflinks 9.4233 0.0 25.3568    
cufflinks 5.42005 0.0 15.1986   Low
cufflinks 44.3473 0.0 126.668 High  
cufflinks 21.5162 0.0 57.7623 High  
cufflinks 3.74412 0.0 10.9885   Low
cufflinks 28.361     High  
cufflinks 0.11       Low
cufflinks 21.464     High  
cufflinks 0.693        
cufflinks 0.632        
cufflinks 1.399        
cufflinks 89.176     High High
cufflinks 0.106       Low
cufflinks 25.579     High  
cufflinks 35.473     High  
cufflinks 98.633     High High
cufflinks 0.253       Low
cufflinks 96.157     High High
cufflinks 70.152     High  
cufflinks 0.126       Low
cufflinks 100.608     High High
cufflinks 0.256       Low

0 Strain