Gene : Glyma.17G103100 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR11673 - TRANSLATION INITIATION FACTOR 5A-RELATED Genomic Order:  1031
Name:  ? Glyma.17G103100 Secondary Identifier:  ? PAC:30480869
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G103100 0.5kb upstream 0.5kb upstream 1894   true Chr17: 8093285-8095178 Glycine max
Glyma.17G103100 0.5kb upstream 0.5kb upstream 500   false Chr17: 8094679-8095178 Glycine max
Glyma.17G103100 0.5kb downstream 0.5kb downstream 1894   true Chr17: 8092785-8094678 Glycine max
Glyma.17G103100 0.5kb downstream 0.5kb downstream 500   false Chr17: 8092785-8093284 Glycine max
Glyma.17G103100 1.0kb upstream 1.0kb upstream 2394   true Chr17: 8093285-8095678 Glycine max
Glyma.17G103100 1.0kb upstream 1.0kb upstream 1000   false Chr17: 8094679-8095678 Glycine max
Glyma.17G103100 1.0kb downstream 1.0kb downstream 2394   true Chr17: 8092285-8094678 Glycine max
Glyma.17G103100 1.0kb downstream 1.0kb downstream 1000   false Chr17: 8092285-8093284 Glycine max
Glyma.17G103100 2.0kb upstream 2.0kb upstream 3394   true Chr17: 8093285-8096678 Glycine max
Glyma.17G103100 2.0kb upstream 2.0kb upstream 2000   false Chr17: 8094679-8096678 Glycine max
Glyma.17G103100 2.0kb downstream 2.0kb downstream 3394   true Chr17: 8091285-8094678 Glycine max
Glyma.17G103100 2.0kb downstream 2.0kb downstream 2000   false Chr17: 8091285-8093284 Glycine max
Glyma.17G103100 5.0kb upstream 5.0kb upstream 6394   true Chr17: 8093285-8099678 Glycine max
Glyma.17G103100 5.0kb upstream 5.0kb upstream 5000   false Chr17: 8094679-8099678 Glycine max
Glyma.17G103100 5.0kb downstream 5.0kb downstream 6394   true Chr17: 8088285-8094678 Glycine max
Glyma.17G103100 5.0kb downstream 5.0kb downstream 5000   false Chr17: 8088285-8093284 Glycine max
Glyma.17G103100 10.0kb upstream 10.0kb upstream 11394   true Chr17: 8093285-8104678 Glycine max
Glyma.17G103100 10.0kb upstream 10.0kb upstream 10000   false Chr17: 8094679-8104678 Glycine max
Glyma.17G103100 10.0kb downstream 10.0kb downstream 11394   true Chr17: 8083285-8094678 Glycine max
Glyma.17G103100 10.0kb downstream 10.0kb downstream 10000   false Chr17: 8083285-8093284 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312678 5265 Fabidae View MSA
124072640 5270 Rosid View MSA
123750235 5271 Pentapetalae View MSA
122796875 5272 Eudicot View MSA
122047476 5273 Angiosperm View MSA
121345847 5274 Embryophyte View MSA
123426583 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 394.597 0.0 1414.35 High  
cufflinks 308.656 0.0 1047.27 High  
cufflinks 264.356 0.0 864.947 High Low
cufflinks 317.244 0.0 1085.33 High  
cufflinks 484.742 0.0 1855.21 High  
cufflinks 366.424 0.0 1299.12 High  
cufflinks 628.887 0.0 2597.23 High High
cufflinks 434.177 0.0 1611.53 High  
cufflinks 391.655 0.0 1412.47 High  
cufflinks 199.102     High  
cufflinks 130.214     High  
cufflinks 139.813     High  
cufflinks 286.507     High High
cufflinks 408.275     High High
cufflinks 121.419     High  
cufflinks 163.275     High  
cufflinks 124.671     High  
cufflinks 145.733     High  
cufflinks 170.182     High  
cufflinks 178.095     High  
cufflinks 113.636     High Low
cufflinks 157.981     High  
cufflinks 150.269     High  
cufflinks 102.936     High Low
cufflinks 172.279     High  
cufflinks 133.971     High  

0 Strain