Gene : Glyma.17G096900 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR21319:SF17 - ZINC ION BINDING PROTEIN Genomic Order:  969
Name:  ? Glyma.17G096900 Secondary Identifier:  ? PAC:30479396
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G096900 0.5kb upstream 0.5kb upstream 11182   true Chr17: 7634514-7645695 Glycine max
Glyma.17G096900 0.5kb upstream 0.5kb upstream 500   false Chr17: 7634514-7635013 Glycine max
Glyma.17G096900 0.5kb downstream 0.5kb downstream 11182   true Chr17: 7635014-7646195 Glycine max
Glyma.17G096900 0.5kb downstream 0.5kb downstream 500   false Chr17: 7645696-7646195 Glycine max
Glyma.17G096900 1.0kb upstream 1.0kb upstream 11682   true Chr17: 7634014-7645695 Glycine max
Glyma.17G096900 1.0kb upstream 1.0kb upstream 1000   false Chr17: 7634014-7635013 Glycine max
Glyma.17G096900 1.0kb downstream 1.0kb downstream 11682   true Chr17: 7635014-7646695 Glycine max
Glyma.17G096900 1.0kb downstream 1.0kb downstream 1000   false Chr17: 7645696-7646695 Glycine max
Glyma.17G096900 2.0kb upstream 2.0kb upstream 12682   true Chr17: 7633014-7645695 Glycine max
Glyma.17G096900 2.0kb upstream 2.0kb upstream 2000   false Chr17: 7633014-7635013 Glycine max
Glyma.17G096900 2.0kb downstream 2.0kb downstream 12682   true Chr17: 7635014-7647695 Glycine max
Glyma.17G096900 2.0kb downstream 2.0kb downstream 2000   false Chr17: 7645696-7647695 Glycine max
Glyma.17G096900 5.0kb upstream 5.0kb upstream 15682   true Chr17: 7630014-7645695 Glycine max
Glyma.17G096900 5.0kb upstream 5.0kb upstream 5000   false Chr17: 7630014-7635013 Glycine max
Glyma.17G096900 5.0kb downstream 5.0kb downstream 15682   true Chr17: 7635014-7650695 Glycine max
Glyma.17G096900 5.0kb downstream 5.0kb downstream 5000   false Chr17: 7645696-7650695 Glycine max
Glyma.17G096900 10.0kb upstream 10.0kb upstream 20682   true Chr17: 7625014-7645695 Glycine max
Glyma.17G096900 10.0kb upstream 10.0kb upstream 10000   false Chr17: 7625014-7635013 Glycine max
Glyma.17G096900 10.0kb downstream 10.0kb downstream 20682   true Chr17: 7635014-7655695 Glycine max
Glyma.17G096900 10.0kb downstream 10.0kb downstream 10000   false Chr17: 7645696-7655695 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304098 5265 Fabidae View MSA
124071903 5270 Rosid View MSA
123743413 5271 Pentapetalae View MSA
122790004 5272 Eudicot View MSA
122047208 5273 Angiosperm View MSA
121348001 5274 Embryophyte View MSA
123428436 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.08268 0.0 27.7917    
cufflinks 3.6474 0.0 13.5153   Low
cufflinks 3.14779 0.0 11.9625   Low
cufflinks 13.0448 0.0 46.4195    
cufflinks 5.1727 0.0 18.2725    
cufflinks 10.274 0.0 39.3408    
cufflinks 4.54843 0.0 16.7242    
cufflinks 21.0649 0.0 80.5802   High
cufflinks 20.7359 0.0 78.7249 High High
cufflinks 0.367        
cufflinks 0.689        
cufflinks 0.521        
cufflinks 0.659        
cufflinks 0.069     Low Low
cufflinks 0.75        
cufflinks 0.212        
cufflinks 2.028       High
cufflinks 0.786        
cufflinks 0.612        
cufflinks 0.192        
cufflinks 0.792        
cufflinks 0.237        
cufflinks 0.214        
cufflinks 1.238        
cufflinks 0.211        
cufflinks 8.466     High High

0 Strain