Gene : Glyma.17G086300 G. max Wm82.a2.v1
Defline:  (1 of 91) PF03195 - Protein of unknown function DUF260 (DUF260) Genomic Order:  863
Name:  ? Glyma.17G086300 Secondary Identifier:  ? PAC:30478741
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G086300 0.5kb upstream 0.5kb upstream 3017   true Chr17: 6660261-6663277 Glycine max
Glyma.17G086300 0.5kb upstream 0.5kb upstream 500   false Chr17: 6660261-6660760 Glycine max
Glyma.17G086300 0.5kb downstream 0.5kb downstream 3017   true Chr17: 6660761-6663777 Glycine max
Glyma.17G086300 0.5kb downstream 0.5kb downstream 500   false Chr17: 6663278-6663777 Glycine max
Glyma.17G086300 1.0kb upstream 1.0kb upstream 3517   true Chr17: 6659761-6663277 Glycine max
Glyma.17G086300 1.0kb upstream 1.0kb upstream 1000   false Chr17: 6659761-6660760 Glycine max
Glyma.17G086300 1.0kb downstream 1.0kb downstream 3517   true Chr17: 6660761-6664277 Glycine max
Glyma.17G086300 1.0kb downstream 1.0kb downstream 1000   false Chr17: 6663278-6664277 Glycine max
Glyma.17G086300 2.0kb upstream 2.0kb upstream 4517   true Chr17: 6658761-6663277 Glycine max
Glyma.17G086300 2.0kb upstream 2.0kb upstream 2000   false Chr17: 6658761-6660760 Glycine max
Glyma.17G086300 2.0kb downstream 2.0kb downstream 4517   true Chr17: 6660761-6665277 Glycine max
Glyma.17G086300 2.0kb downstream 2.0kb downstream 2000   false Chr17: 6663278-6665277 Glycine max
Glyma.17G086300 5.0kb upstream 5.0kb upstream 7517   true Chr17: 6655761-6663277 Glycine max
Glyma.17G086300 5.0kb upstream 5.0kb upstream 5000   false Chr17: 6655761-6660760 Glycine max
Glyma.17G086300 5.0kb downstream 5.0kb downstream 7517   true Chr17: 6660761-6668277 Glycine max
Glyma.17G086300 5.0kb downstream 5.0kb downstream 5000   false Chr17: 6663278-6668277 Glycine max
Glyma.17G086300 10.0kb upstream 10.0kb upstream 12517   true Chr17: 6650761-6663277 Glycine max
Glyma.17G086300 10.0kb upstream 10.0kb upstream 10000   false Chr17: 6650761-6660760 Glycine max
Glyma.17G086300 10.0kb downstream 10.0kb downstream 12517   true Chr17: 6660761-6673277 Glycine max
Glyma.17G086300 10.0kb downstream 10.0kb downstream 10000   false Chr17: 6663278-6673277 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313203 5265 Fabidae View MSA
124070294 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.27908 0.0 18.6697   High
cufflinks 0.0821511 0.0 0.333038 Low  
cufflinks 0.101048 0.0 0.406081 Low  
cufflinks 0.0796404 0.0 0.323528 Low  
cufflinks 0.0700801 0.0 0.286525 Low  
cufflinks 0.263405 0.0 1.02179    
cufflinks 0.257008 0.0 0.997327    
cufflinks 0.0926197 0.0 0.373523 Low  
cufflinks 0.04     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.088     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.083     Low  
cufflinks 0.04     Low  
cufflinks 0.338       High
cufflinks 1.954       High
cufflinks 0.029     Low  
cufflinks 0.025     Low  
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.094     Low  
cufflinks 0.007     Low Low

0 Strain