Gene : Glyma.17G089600 G. max Wm82.a2.v1
Defline:  (1 of 5) 1.1.1.267 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase / DXP-reductoisomerase Genomic Order:  896
Name:  ? Glyma.17G089600 Secondary Identifier:  ? PAC:30480202
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7560 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G089600 0.5kb upstream 0.5kb upstream 6035   true Chr17: 6975931-6981965 Glycine max
Glyma.17G089600 0.5kb upstream 0.5kb upstream 500   false Chr17: 6981466-6981965 Glycine max
Glyma.17G089600 0.5kb downstream 0.5kb downstream 6035   true Chr17: 6975431-6981465 Glycine max
Glyma.17G089600 0.5kb downstream 0.5kb downstream 500   false Chr17: 6975431-6975930 Glycine max
Glyma.17G089600 1.0kb upstream 1.0kb upstream 6535   true Chr17: 6975931-6982465 Glycine max
Glyma.17G089600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 6981466-6982465 Glycine max
Glyma.17G089600 1.0kb downstream 1.0kb downstream 6535   true Chr17: 6974931-6981465 Glycine max
Glyma.17G089600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 6974931-6975930 Glycine max
Glyma.17G089600 2.0kb upstream 2.0kb upstream 7535   true Chr17: 6975931-6983465 Glycine max
Glyma.17G089600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 6981466-6983465 Glycine max
Glyma.17G089600 2.0kb downstream 2.0kb downstream 7535   true Chr17: 6973931-6981465 Glycine max
Glyma.17G089600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 6973931-6975930 Glycine max
Glyma.17G089600 5.0kb upstream 5.0kb upstream 10535   true Chr17: 6975931-6986465 Glycine max
Glyma.17G089600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 6981466-6986465 Glycine max
Glyma.17G089600 5.0kb downstream 5.0kb downstream 10535   true Chr17: 6970931-6981465 Glycine max
Glyma.17G089600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 6970931-6975930 Glycine max
Glyma.17G089600 10.0kb upstream 10.0kb upstream 15535   true Chr17: 6975931-6991465 Glycine max
Glyma.17G089600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 6981466-6991465 Glycine max
Glyma.17G089600 10.0kb downstream 10.0kb downstream 15535   true Chr17: 6965931-6981465 Glycine max
Glyma.17G089600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 6965931-6975930 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041406 5273 Angiosperm View MSA
122304768 5265 Fabidae View MSA
124066605 5270 Rosid View MSA
123736883 5271 Pentapetalae View MSA
122791920 5272 Eudicot View MSA
121344534 5274 Embryophyte View MSA
123424385 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.3519 0.0 72.0978   High
cufflinks 10.6481 0.0 37.4279    
cufflinks 3.73006 0.0 13.6518   Low
cufflinks 3.90293 0.0 14.2908    
cufflinks 16.302 0.0 56.3892    
cufflinks 30.1098 0.0 109.722 High High
cufflinks 3.93098 0.0 16.8347    
cufflinks 5.09033 0.0 20.1463    
cufflinks 6.75309 0.0 25.3188    
cufflinks 0.963       Low
cufflinks 4.598        
cufflinks 1.135       Low
cufflinks 2.81        
cufflinks 2.168        
cufflinks 7.605     High High
cufflinks 2.635        
cufflinks 3.452        
cufflinks 1.626        
cufflinks 2.546        
cufflinks 1.947        
cufflinks 7.872     High High
cufflinks 2.388        
cufflinks 2.678        
cufflinks 6.93     High High
cufflinks 2.169        
cufflinks 5.911       High

0 Strain