Gene : Glyma.17G126600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11669:SF3 - PROTEIN STICHEL-LIKE 2 Genomic Order:  1266
Name:  ? Glyma.17G126600 Secondary Identifier:  ? PAC:30479063
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.17G126600 0.5kb upstream 0.5kb upstream 7260   true Chr17: 10100590-10107849 Glycine max
Glyma.17G126600 0.5kb upstream 0.5kb upstream 500   false Chr17: 10100590-10101089 Glycine max
Glyma.17G126600 0.5kb downstream 0.5kb downstream 7260   true Chr17: 10101090-10108349 Glycine max
Glyma.17G126600 0.5kb downstream 0.5kb downstream 500   false Chr17: 10107850-10108349 Glycine max
Glyma.17G126600 1.0kb upstream 1.0kb upstream 7760   true Chr17: 10100090-10107849 Glycine max
Glyma.17G126600 1.0kb upstream 1.0kb upstream 1000   false Chr17: 10100090-10101089 Glycine max
Glyma.17G126600 1.0kb downstream 1.0kb downstream 7760   true Chr17: 10101090-10108849 Glycine max
Glyma.17G126600 1.0kb downstream 1.0kb downstream 1000   false Chr17: 10107850-10108849 Glycine max
Glyma.17G126600 2.0kb upstream 2.0kb upstream 8760   true Chr17: 10099090-10107849 Glycine max
Glyma.17G126600 2.0kb upstream 2.0kb upstream 2000   false Chr17: 10099090-10101089 Glycine max
Glyma.17G126600 2.0kb downstream 2.0kb downstream 8760   true Chr17: 10101090-10109849 Glycine max
Glyma.17G126600 2.0kb downstream 2.0kb downstream 2000   false Chr17: 10107850-10109849 Glycine max
Glyma.17G126600 5.0kb upstream 5.0kb upstream 11760   true Chr17: 10096090-10107849 Glycine max
Glyma.17G126600 5.0kb upstream 5.0kb upstream 5000   false Chr17: 10096090-10101089 Glycine max
Glyma.17G126600 5.0kb downstream 5.0kb downstream 11760   true Chr17: 10101090-10112849 Glycine max
Glyma.17G126600 5.0kb downstream 5.0kb downstream 5000   false Chr17: 10107850-10112849 Glycine max
Glyma.17G126600 10.0kb upstream 10.0kb upstream 16760   true Chr17: 10091090-10107849 Glycine max
Glyma.17G126600 10.0kb upstream 10.0kb upstream 10000   false Chr17: 10091090-10101089 Glycine max
Glyma.17G126600 10.0kb downstream 10.0kb downstream 16760   true Chr17: 10101090-10117849 Glycine max
Glyma.17G126600 10.0kb downstream 10.0kb downstream 10000   false Chr17: 10107850-10117849 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311123 5265 Fabidae View MSA
124063569 5270 Rosid View MSA
123738968 5271 Pentapetalae View MSA
122794041 5272 Eudicot View MSA
122048856 5273 Angiosperm View MSA
121350538 5274 Embryophyte View MSA
123381780 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0203521 0.0 0.0829331 Low Low
cufflinks 4.95571 0.0 19.0043   High
cufflinks 1.08743 0.0 5.51918    
cufflinks 2.02225 0.0 9.43102    
cufflinks 0.907554 0.0 5.00378    
cufflinks 0.509259 0.0 3.25279    
cufflinks 1.7097 0.0 8.70926    
cufflinks 0.472623 0.0 2.59715    
cufflinks 0.373765 0.0 2.12034    
cufflinks 0.09     Low  
cufflinks 0.003     Low Low
cufflinks 0.239        
cufflinks 0.073     Low  
cufflinks 0.149        
cufflinks 0.001     Low Low
cufflinks 0.124        
cufflinks 0.003     Low Low
cufflinks 0.253        
cufflinks 0.606       High
cufflinks 0.099        
cufflinks 0.006     Low  
cufflinks 0.141        
cufflinks 0.24        
cufflinks 0.001     Low Low
cufflinks 0.173        
cufflinks 0.016     Low  

0 Strain